RNA–Protein interactions for RNA: ENST00000637909.1

CLCN2-221, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-221ENST00000637909 MARF1Q9Y4F3 1742 aaKnown RBP13.2□□□□□ -0.3
CLCN2-221ENST00000637909 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
CLCN2-221ENST00000637909 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
CLCN2-221ENST00000637909 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
CLCN2-221ENST00000637909 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
CLCN2-221ENST00000637909 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
CLCN2-221ENST00000637909 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
CLCN2-221ENST00000637909 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
CLCN2-221ENST00000637909 DCCP43146 1447 aa13.18□□□□□ -0.3
CLCN2-221ENST00000637909 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
CLCN2-221ENST00000637909 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
CLCN2-221ENST00000637909 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
CLCN2-221ENST00000637909 MST1RQ04912 1400 aa13.17□□□□□ -0.3
CLCN2-221ENST00000637909 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
CLCN2-221ENST00000637909 IP6K1Q92551 441 aa13.17□□□□□ -0.3
CLCN2-221ENST00000637909 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
CLCN2-221ENST00000637909 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
CLCN2-221ENST00000637909 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
CLCN2-221ENST00000637909 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
CLCN2-221ENST00000637909 MAP3K5Q99683 1374 aa13.16□□□□□ -0.3
CLCN2-221ENST00000637909 BECN1Q14457 450 aa13.16□□□□□ -0.3
CLCN2-221ENST00000637909 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
CLCN2-221ENST00000637909 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
CLCN2-221ENST00000637909 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
CLCN2-221ENST00000637909 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
CLCN2-221ENST00000637909 PTPRCP08575 1304 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 GCP02774 474 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 EIF2S2P20042 333 aaKnown RBP13.15□□□□□ -0.3
CLCN2-221ENST00000637909 RTL1A6NKG5 1358 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 KCNQ3O43525 872 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
CLCN2-221ENST00000637909 CNPY4Q8N129 248 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
CLCN2-221ENST00000637909 LTN1O94822 1766 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
CLCN2-221ENST00000637909 FLIIQ13045 1269 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
CLCN2-221ENST00000637909 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
CLCN2-221ENST00000637909 ANXA1P04083 346 aa13.13□□□□□ -0.31
CLCN2-221ENST00000637909 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
CLCN2-221ENST00000637909 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
CLCN2-221ENST00000637909 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
CLCN2-221ENST00000637909 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 NFAT5O94916 1531 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 GTF2E1P29083 439 aaPredicted RBP13.12□□□□□ -0.31
CLCN2-221ENST00000637909 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
CLCN2-221ENST00000637909 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
CLCN2-221ENST00000637909 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
CLCN2-221ENST00000637909 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
CLCN2-221ENST00000637909 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
CLCN2-221ENST00000637909 EXOC6BQ9Y2D4 811 aa13.11□□□□□ -0.31
CLCN2-221ENST00000637909 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
CLCN2-221ENST00000637909 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
CLCN2-221ENST00000637909 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
CLCN2-221ENST00000637909 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
CLCN2-221ENST00000637909 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
CLCN2-221ENST00000637909 TEFQ10587 303 aa13.09□□□□□ -0.31
CLCN2-221ENST00000637909 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.32
CLCN2-221ENST00000637909 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
CLCN2-221ENST00000637909 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
CLCN2-221ENST00000637909 GNAI2P04899 355 aa13.08□□□□□ -0.32
CLCN2-221ENST00000637909 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
CLCN2-221ENST00000637909 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
CLCN2-221ENST00000637909 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
CLCN2-221ENST00000637909 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
CLCN2-221ENST00000637909 LRRFIP2Q9Y608 721 aaKnown RBP13.07□□□□□ -0.32
CLCN2-221ENST00000637909 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
CLCN2-221ENST00000637909 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
CLCN2-221ENST00000637909 PXDNQ92626 1479 aa13.07□□□□□ -0.32
CLCN2-221ENST00000637909 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
CLCN2-221ENST00000637909 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 CDC45O75419 566 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
CLCN2-221ENST00000637909 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 USP54Q70EL1 1684 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 CHRNA2Q15822 529 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 HSCBQ8IWL3 235 aa13.06□□□□□ -0.32
CLCN2-221ENST00000637909 HMMRO75330 724 aa13.05□□□□□ -0.32
CLCN2-221ENST00000637909 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
CLCN2-221ENST00000637909 SDSP20132 328 aa13.05□□□□□ -0.32
CLCN2-221ENST00000637909 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
CLCN2-221ENST00000637909 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms