RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 POLD1P28340 1107 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 PSMA5P28066 241 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 IKQ13123 557 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 NFATC2IPQ8NCF5 419 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
SRGAP2-217ENST00000624873 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 MTHFSDQ2M296 383 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 LRP2BPQ9P2M1 347 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 METP08581 1390 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 RARSP54136 660 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
SRGAP2-217ENST00000624873 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.448e-7■■■□□ 14.9
SRGAP2-217ENST00000624873 KIF1BPQ96EK5 621 aa12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 MCTP1Q6DN14 999 aa12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
SRGAP2-217ENST00000624873 ABCC3O15438 1527 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 F6X3S4 739 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
SRGAP2-217ENST00000624873 ABCA9Q8IUA7 1624 aa12.27□□□□□ -0.44
SRGAP2-217ENST00000624873 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.44
SRGAP2-217ENST00000624873 ATP5J2-PTCD1G3V325 749 aa12.27□□□□□ -0.44
SRGAP2-217ENST00000624873 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
SRGAP2-217ENST00000624873 SLC5A1P13866 664 aa12.27□□□□□ -0.45
SRGAP2-217ENST00000624873 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
SRGAP2-217ENST00000624873 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.45
SRGAP2-217ENST00000624873 IL1RAPL2Q9NP60 686 aa12.27□□□□□ -0.45
SRGAP2-217ENST00000624873 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
SRGAP2-217ENST00000624873 XBP1P17861 261 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 BAG6P46379 1132 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 COPS6Q7L5N1 327 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 XAGE3Q8WTP9 111 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 IDH1O75874 414 aaKnown RBP12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 UBE3BQ7Z3V4 1068 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 PTPRTO14522 1441 aa12.26□□□□□ -0.45
SRGAP2-217ENST00000624873 TPM4P67936 248 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 PARD3Q8TEW0 1356 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 MTMR7Q9Y216 660 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 NIP7Q9Y221 180 aaKnown RBP eCLIP12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 SBNO2Q9Y2G9 1366 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 ANXA1P04083 346 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 CTNNA3Q9UI47 895 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
SRGAP2-217ENST00000624873 CDC42BPAQ5VT25 1732 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 KDM5CP41229 1560 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 ATP2B2Q01814 1243 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
SRGAP2-217ENST00000624873 CHD1LQ86WJ1 897 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 LRRFIP2Q9Y608 721 aaKnown RBP12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 SMC3Q9UQE7 1217 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 PRDM15P57071 1507 aaPredicted RBP12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 GNPATO15228 680 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 TDO2P48775 406 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 KSR2Q6VAB6 950 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 CCDC43Q96MW1 224 aaKnown RBP12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 ROBO2Q9HCK4 1378 aa12.23□□□□□ -0.45
SRGAP2-217ENST00000624873 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 DZIP1Q86YF9 867 aaKnown RBP12.22□□□□□ -0.45
SRGAP2-217ENST00000624873 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms