RNA–Protein interactions for RNA: ENST00000616868.1

SULF1-223, Transcript of sulfatase 1, human

TSL 5 BASIC

Gene SULF1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SULF1-223	ENST00000616868	ZKSCAN5	Q9Y2L8	839 aa		14.06	□□□□□ -0.16
SULF1-223	ENST00000616868	MARF1	Q9Y4F3	1742 aa	Known RBP	14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	HOXC9	P31274	260 aa		14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	SASS6	Q6UVJ0	657 aa		14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	ZNF830	Q96NB3	372 aa	Predicted RBP	14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	PRPF40A	O75400	957 aa	Known RBP	14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	C17orf53	Q8N3J3	647 aa	Predicted RBP	14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	SNX21	Q969T3	373 aa		14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	KIF2C	Q99661	725 aa		14.05	□□□□□ -0.16
SULF1-223	ENST00000616868	NCOA3	Q9Y6Q9	1424 aa		14.04	□□□□□ -0.16
SULF1-223	ENST00000616868		K7ELQ4	463 aa	Predicted RBP	14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	EXOSC9	Q06265	439 aa	Known RBP	14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	DZIP1L	Q8IYY4	767 aa	Known RBP	14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	EYA1	Q99502	592 aa		14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	VGLL3	A8MV65	326 aa		14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	GTF2E1	P29083	439 aa	Predicted RBP	14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	PPP4R3B	Q5MIZ7	849 aa		14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	USHBP1	Q8N6Y0	703 aa		14.04	□□□□□ -0.16
SULF1-223	ENST00000616868	CHMP4B	Q9H444	224 aa	Known RBP	14.03	□□□□□ -0.16
SULF1-223	ENST00000616868	SYCE3	A1L190	88 aa		14.03	□□□□□ -0.16
SULF1-223	ENST00000616868	RBM25	P49756	843 aa	Known RBP	14.03	□□□□□ -0.16
SULF1-223	ENST00000616868	MST1R	Q04912	1400 aa		14.03	□□□□□ -0.16
SULF1-223	ENST00000616868	ATP2B3	Q16720	1220 aa		14.03	□□□□□ -0.16
SULF1-223	ENST00000616868	CADPS2	Q86UW7	1296 aa		14.02	□□□□□ -0.16
SULF1-223	ENST00000616868	MSH6	P52701	1360 aa		14.02	□□□□□ -0.16
SULF1-223	ENST00000616868	ZBTB22	O15209	634 aa		14.02	□□□□□ -0.17
SULF1-223	ENST00000616868	ZKSCAN2	Q63HK3	967 aa		14.02	□□□□□ -0.17
SULF1-223	ENST00000616868	DLG5	Q8TDM6	1919 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	GC	P02774	474 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	SMC4	Q9NTJ3	1288 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	CSPP1	Q1MSJ5	1256 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	MCM10	Q7L590	875 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	MTERF4	Q7Z6M4	381 aa	Known RBP	14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	ZNF710	Q8N1W2	664 aa		14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	NSFL1C	Q9UNZ2	370 aa	Known RBP	14.01	□□□□□ -0.17
SULF1-223	ENST00000616868	ZC3H6	P61129	1189 aa	Known RBP	14	□□□□□ -0.17
SULF1-223	ENST00000616868	CABLES1	Q8TDN4	633 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	ELL2	O00472	640 aa	Predicted RBP	14	□□□□□ -0.17
SULF1-223	ENST00000616868	LMBRD1	Q9NUN5	540 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	LTN1	O94822	1766 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	PTMS	P20962	102 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	ZNF445	P59923	1031 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	14	□□□□□ -0.17
SULF1-223	ENST00000616868	FOXD4L3	Q6VB84	417 aa	Predicted RBP	14	□□□□□ -0.17
SULF1-223	ENST00000616868	PDLIM2	Q96JY6	352 aa		14	□□□□□ -0.17
SULF1-223	ENST00000616868	NCBP3	Q53F19	620 aa	Known RBP	13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	GPT2	Q8TD30	523 aa		13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	XIRP1	Q702N8	1843 aa	Known RBP	13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	TRIM27	P14373	513 aa		13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	KCNH5	Q8NCM2	988 aa		13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	LRRC59	Q96AG4	307 aa	Known RBP	13.99	□□□□□ -0.17
SULF1-223	ENST00000616868	MTHFSD	Q2M296	383 aa	Known RBP	13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	UTP14C	Q5TAP6	766 aa	Known RBP	13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	ANKRD45	Q5TZF3	282 aa		13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	C1orf115	Q9H7X2	142 aa		13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	HS1BP3	Q53T59	392 aa		13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
SULF1-223	ENST00000616868	IP6K1	Q92551	441 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	TMEM63C	Q9P1W3	806 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	CCDC39	Q9UFE4	941 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	IGSF1	Q8N6C5	1336 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	ARHGEF10	O15013	1369 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	RGPD1	P0DJD0	1748 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	PLCD3	Q8N3E9	789 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	TMEM57	Q8N5G2	664 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	IL16	Q14005	1332 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	NFAT5	O94916	1531 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	TBC1D9	Q6ZT07	1266 aa		13.97	□□□□□ -0.17
SULF1-223	ENST00000616868	ZGPAT	Q8N5A5	531 aa	Known RBP	13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	MBIP	Q9NS73	344 aa		13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	NBPF6	Q5VWK0	638 aa		13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	BRINP3	Q76B58	766 aa		13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	NBPF4	Q96M43	638 aa		13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	NOB1	Q9ULX3	412 aa	Known RBP	13.96	□□□□□ -0.17
SULF1-223	ENST00000616868	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.96	□□□□□ -0.18
SULF1-223	ENST00000616868	LMOD3	Q0VAK6	560 aa		13.96	□□□□□ -0.18
SULF1-223	ENST00000616868	TSPYL6	Q8N831	410 aa		13.96	□□□□□ -0.18
SULF1-223	ENST00000616868	MIS18A	Q9NYP9	233 aa		13.96	□□□□□ -0.18
SULF1-223	ENST00000616868	AXIN2	Q9Y2T1	843 aa		13.96	□□□□□ -0.18
SULF1-223	ENST00000616868	AK9	Q5TCS8	1911 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	KIF1A	Q12756	1690 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	KIAA2012	Q0VF49	1180 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	SSH1	Q8WYL5	1049 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	SLAIN2	Q9P270	581 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	CGN	Q9P2M7	1197 aa	Known RBP	13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	DCC	P43146	1447 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	NPHP3	Q7Z494	1330 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	ARHGEF25	Q86VW2	580 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	MYRIP	Q8NFW9	859 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	USP54	Q70EL1	1684 aa		13.95	□□□□□ -0.18
SULF1-223	ENST00000616868	CHD1L	Q86WJ1	897 aa		13.94	□□□□□ -0.18
SULF1-223	ENST00000616868	GNAI1	P63096	354 aa		13.94	□□□□□ -0.18
SULF1-223	ENST00000616868	HDAC1	Q13547	482 aa	Predicted RBP	13.94	□□□□□ -0.18
SULF1-223	ENST00000616868	TTC12	Q9H892	705 aa	Predicted RBP	13.94	□□□□□ -0.18
SULF1-223	ENST00000616868	KIF16B	Q96L93	1317 aa		13.94	□□□□□ -0.18
SULF1-223	ENST00000616868	KRT24	Q2M2I5	525 aa		13.93	□□□□□ -0.18
SULF1-223	ENST00000616868	IFT57	Q9NWB7	429 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms