RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 BLOC1S2Q6QNY1 142 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 SPC24Q8NBT2 197 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 ST5P78524 1137 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 CEP126Q9P2H0 1117 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 NOS1P29475 1434 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 SMC2O95347 1197 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 ACBD3Q9H3P7 528 aa15.04■□□□□ -0
DNMT1-228ENST00000592705 AACSQ86V21 672 aa15.03■□□□□ -0
DNMT1-228ENST00000592705 JAKMIP1Q96N16 626 aaKnown RBP15.03■□□□□ -0
DNMT1-228ENST00000592705 IL1RAPL2Q9NP60 686 aa15.03■□□□□ -0
DNMT1-228ENST00000592705 HDAC1Q13547 482 aaPredicted RBP15.03■□□□□ -0
DNMT1-228ENST00000592705 NACAP1Q9BZK3 213 aa15.03■□□□□ -0
DNMT1-228ENST00000592705 A2MP01023 1474 aa15.03■□□□□ -0
DNMT1-228ENST00000592705 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
DNMT1-228ENST00000592705 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
DNMT1-228ENST00000592705 CWC27Q6UX04 472 aaKnown RBP15.03■□□□□ -0
DNMT1-228ENST00000592705 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
DNMT1-228ENST00000592705 NUP153P49790 1475 aaKnown RBP15.02■□□□□ -0
DNMT1-228ENST00000592705 C6orf229H3BNL8 230 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 SETQ01105 290 aaPredicted RBP15.02■□□□□ -0
DNMT1-228ENST00000592705 KRT32Q14532 448 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 PDILTQ8N807 584 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 ZMYM3Q14202 1370 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 ANKRD36BQ8N2N9 1353 aa15.02■□□□□ -0
DNMT1-228ENST00000592705 SYCE3A1L190 88 aa15.02□□□□□ -0.01
DNMT1-228ENST00000592705 JMYQ8N9B5 988 aa15.02□□□□□ -0.01
DNMT1-228ENST00000592705 KIF1BPQ96EK5 621 aa15.02□□□□□ -0.01
DNMT1-228ENST00000592705 ARHGEF12Q9NZN5 1544 aa15.02□□□□□ -0.01
DNMT1-228ENST00000592705 UQCRHLA0A096LP55 91 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 UQCRHP07919 91 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 STK3Q13188 491 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 MCM10Q7L590 875 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
DNMT1-228ENST00000592705 NUP62CLQ9H1M0 184 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 SMARCA5O60264 1052 aaPredicted RBP15.01□□□□□ -0.01
DNMT1-228ENST00000592705 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 PTPRCP08575 1304 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 DUOX2Q9NRD8 1548 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
DNMT1-228ENST00000592705 GRM1Q13255 1194 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 SIL1Q9H173 461 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 CFAP45Q9UL16 551 aa15.01□□□□□ -0.01
DNMT1-228ENST00000592705 SSFA2P28290 1259 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 CAVIN4Q5BKX8 364 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 NME9Q86XW9 330 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 C8orf34Q49A92 452 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 TBC1D9Q6ZT07 1266 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 NUTM1Q86Y26 1132 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 ACSBG1Q96GR2 724 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 KDM5BQ9UGL1 1544 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 GLRX3O76003 335 aaKnown RBP15□□□□□ -0.01
DNMT1-228ENST00000592705 DCTN1Q14203 1278 aa15□□□□□ -0.01
DNMT1-228ENST00000592705 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
DNMT1-228ENST00000592705 RAI14Q9P0K7 980 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 TRMT112Q9UI30 125 aaKnown RBP14.99□□□□□ -0.01
DNMT1-228ENST00000592705 CASTP20810 708 aaKnown RBP14.99□□□□□ -0.01
DNMT1-228ENST00000592705 ZSCAN25Q6NSZ9 544 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
DNMT1-228ENST00000592705 CDCA7Q9BWT1 371 aaPredicted RBP14.99□□□□□ -0.01
DNMT1-228ENST00000592705 ME1P48163 572 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 HSP90B2PQ58FF3 399 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 ARHGAP45Q92619 1136 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
DNMT1-228ENST00000592705 ABCC10Q5T3U5 1492 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 NUCB1Q02818 461 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
DNMT1-228ENST00000592705 ACEP12821 1306 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 IFIT1P09914 478 aaKnown RBP14.98□□□□□ -0.01
DNMT1-228ENST00000592705 KCNA6P17658 529 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 MIS18AQ9NYP9 233 aa14.98□□□□□ -0.01
DNMT1-228ENST00000592705 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
DNMT1-228ENST00000592705 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-228ENST00000592705 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 RIMS2Q9UQ26 1411 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 FILIP1LQ4L180 1135 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 CCDC183Q5T5S1 534 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 NBPF6Q5VWK0 638 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-228ENST00000592705 NBPF4Q96M43 638 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 CCDC85AQ96PX6 553 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-228ENST00000592705 LRP2BPQ9P2M1 347 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 ATP10BO94823 1461 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 WDR62O43379 1518 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 MYO1BO43795 1136 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 BEGAINQ9BUH8 593 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 SH2B1Q9NRF2 756 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-228ENST00000592705 PCDHB15Q9Y5E8 787 aa14.97□□□□□ -0.01
DNMT1-228ENST00000592705 SLF2Q8IX21 1173 aa14.96□□□□□ -0.01
DNMT1-228ENST00000592705 USP21Q9UK80 565 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms