RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
RUNDC3A-203ENST00000587483 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
RUNDC3A-203ENST00000587483 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
RUNDC3A-203ENST00000587483 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
RUNDC3A-203ENST00000587483 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
RUNDC3A-203ENST00000587483 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
RUNDC3A-203ENST00000587483 MCCP23508 829 aa13.57□□□□□ -0.24
RUNDC3A-203ENST00000587483 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
RUNDC3A-203ENST00000587483 ERC2O15083 957 aa13.56□□□□□ -0.24
RUNDC3A-203ENST00000587483 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
RUNDC3A-203ENST00000587483 ZNF445P59923 1031 aa13.56□□□□□ -0.24
RUNDC3A-203ENST00000587483 ZSCAN30Q86W11 494 aa13.56□□□□□ -0.24
RUNDC3A-203ENST00000587483 KCNJ4P48050 445 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 SETD1AO15047 1707 aaKnown RBP13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 CHL1O00533 1208 aa13.55□□□□□ -0.24
RUNDC3A-203ENST00000587483 ANXA1P04083 346 aa13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 GPT2Q8TD30 523 aa13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 METP08581 1390 aa13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 SURF6O75683 361 aaKnown RBP13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
RUNDC3A-203ENST00000587483 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
RUNDC3A-203ENST00000587483 MON2Q7Z3U7 1717 aa13.53□□□□□ -0.24
RUNDC3A-203ENST00000587483 PTPRCP08575 1304 aa13.52□□□□□ -0.24
RUNDC3A-203ENST00000587483 GNAI2P04899 355 aa13.52□□□□□ -0.25
RUNDC3A-203ENST00000587483 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
RUNDC3A-203ENST00000587483 TMX3Q96JJ7 454 aa13.52□□□□□ -0.25
RUNDC3A-203ENST00000587483 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
RUNDC3A-203ENST00000587483 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 FIBPO43427 364 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 PDE1AP54750 535 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 NLRP6P59044 892 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 C3P01024 1663 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 CPA1P15085 419 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
RUNDC3A-203ENST00000587483 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 TPM2P07951 284 aa13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 MTHFSDQ2M296 383 aaKnown RBP13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
RUNDC3A-203ENST00000587483 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 AKAP12Q02952 1782 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 VPS37CA5D8V6 355 aaPredicted RBP13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 ACEP12821 1306 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 OFD1O75665 1012 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 MX1P20591 662 aa13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
RUNDC3A-203ENST00000587483 CRB1P82279 1406 aa13.48□□□□□ -0.25
RUNDC3A-203ENST00000587483 FOSBP53539 338 aa13.48□□□□□ -0.25
RUNDC3A-203ENST00000587483 PDLIM2Q96JY6 352 aa13.47□□□□□ -0.25
RUNDC3A-203ENST00000587483 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
RUNDC3A-203ENST00000587483 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
RUNDC3A-203ENST00000587483 UNC5CLQ8IV45 518 aa13.47□□□□□ -0.25
RUNDC3A-203ENST00000587483 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
RUNDC3A-203ENST00000587483 GADD45BO75293 160 aaPredicted RBP13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 FLIIQ13045 1269 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 C17orf53Q8N3J3 647 aaPredicted RBP13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 ESYT1Q9BSJ8 1104 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 RIMS1Q86UR5 1692 aaKnown RBP13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 SRGAP3O43295 1099 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
RUNDC3A-203ENST00000587483 UQCRHLA0A096LP55 91 aa13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 UQCRHP07919 91 aa13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 CCT4P50991 539 aaKnown RBP13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 FERMT3Q86UX7 667 aa13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 PEAK1Q9H792 1746 aa13.46□□□□□ -0.26
RUNDC3A-203ENST00000587483 TSC1Q92574 1164 aa13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 USP25Q9UHP3 1055 aa13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
RUNDC3A-203ENST00000587483 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
RUNDC3A-203ENST00000587483 TSPY26PQ9H489 355 aa13.44□□□□□ -0.26
RUNDC3A-203ENST00000587483 PPFIA3O75145 1194 aa13.44□□□□□ -0.26
RUNDC3A-203ENST00000587483 BRD1O95696 1058 aa13.44□□□□□ -0.26
RUNDC3A-203ENST00000587483 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
RUNDC3A-203ENST00000587483 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 FGD1P98174 961 aa13.43□□□□□ -0.26
RUNDC3A-203ENST00000587483 KIAA2012Q0VF49 1180 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms