RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 MIS18AQ9NYP9 233 aa18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 RIMBP3Q9UFD9 1639 aa18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 NOL7Q9UMY1 257 aaKnown RBP18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 KIF3AQ9Y496 699 aa18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
TRAPPC8-210ENST00000582513 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC8-210ENST00000582513 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
TRAPPC8-210ENST00000582513 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC8-210ENST00000582513 PPP1R9BQ96SB3 815 aa18.74■□□□□ 0.59
TRAPPC8-210ENST00000582513 KIF2CQ99661 725 aa18.74■□□□□ 0.59
TRAPPC8-210ENST00000582513 FAM43BQ6ZT52 329 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC8-210ENST00000582513 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
TRAPPC8-210ENST00000582513 DLG5Q8TDM6 1919 aa18.73■□□□□ 0.59
TRAPPC8-210ENST00000582513 ZNF622Q969S3 477 aaKnown RBP eCLIP18.73■□□□□ 0.593e-7■■■□□ 15.6
TRAPPC8-210ENST00000582513 ZKSCAN5Q9Y2L8 839 aa18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 SETD1AO15047 1707 aaKnown RBP18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 ZNF500O60304 480 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 PIK3R4Q99570 1358 aa18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 PSEN1P49768 467 aa18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC8-210ENST00000582513 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 SPATA31D1Q6ZQQ2 1576 aa18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 MYRIPQ8NFW9 859 aa18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 GSPT1P15170 499 aaKnown RBP18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 CAPN2P17655 700 aa18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
TRAPPC8-210ENST00000582513 GTF2A1P52655 376 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 ACEP12821 1306 aa18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 NRXN3Q9Y4C0 1643 aa18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 FOXO3O43524 673 aa18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC8-210ENST00000582513 SLC26A8Q96RN1 970 aa18.69■□□□□ 0.58
TRAPPC8-210ENST00000582513 TTC21BQ7Z4L5 1316 aa18.69■□□□□ 0.58
TRAPPC8-210ENST00000582513 TNPO1Q92973 898 aaKnown RBP18.69■□□□□ 0.58
TRAPPC8-210ENST00000582513 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
TRAPPC8-210ENST00000582513 DIP2BQ9P265 1576 aa18.68■□□□□ 0.58
TRAPPC8-210ENST00000582513 AXDND1Q5T1B0 1012 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC8-210ENST00000582513 RNF214Q8ND24 703 aa18.68■□□□□ 0.58
TRAPPC8-210ENST00000582513 SNX21Q969T3 373 aa18.68■□□□□ 0.58
TRAPPC8-210ENST00000582513 RSPH14Q9UHP6 348 aa18.67■□□□□ 0.58
TRAPPC8-210ENST00000582513 GOLGA6L22H0YM25 854 aa18.67■□□□□ 0.58
TRAPPC8-210ENST00000582513 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
TRAPPC8-210ENST00000582513 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
TRAPPC8-210ENST00000582513 MEIS3Q99687 375 aa18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 CDC45O75419 566 aa18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 CALCOCO1Q9P1Z2 691 aa18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 AGLP35573 1532 aa18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
TRAPPC8-210ENST00000582513 DDIT3P35638 169 aa18.65■□□□□ 0.58
TRAPPC8-210ENST00000582513 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
TRAPPC8-210ENST00000582513 F6X3S4 739 aa18.65■□□□□ 0.58
TRAPPC8-210ENST00000582513 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
TRAPPC8-210ENST00000582513 CHL1O00533 1208 aa18.64■□□□□ 0.58
TRAPPC8-210ENST00000582513 C17orf53Q8N3J3 647 aaPredicted RBP18.64■□□□□ 0.58
TRAPPC8-210ENST00000582513 LTKP29376 864 aa18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 CEBPAP49715 358 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 SKOR2Q2VWA4 1001 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 MSH6P52701 1360 aa18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 MMP14P50281 582 aa18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 HDGFP51858 240 aaKnown RBP18.64■□□□□ 0.57
TRAPPC8-210ENST00000582513 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 G2E3Q7L622 706 aa18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 NCOA3Q9Y6Q9 1424 aa18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 K7ELQ4 463 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.63■□□□□ 0.57
TRAPPC8-210ENST00000582513 CEP85Q6P2H3 762 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 ANKRD44Q8N8A2 993 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 TNRQ92752 1358 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 CCDC39Q9UFE4 941 aa18.62■□□□□ 0.57
TRAPPC8-210ENST00000582513 MON2Q7Z3U7 1717 aa18.61■□□□□ 0.57
TRAPPC8-210ENST00000582513 SSFA2P28290 1259 aa18.61■□□□□ 0.57
TRAPPC8-210ENST00000582513 MAP3K19Q56UN5 1328 aa18.61■□□□□ 0.57
TRAPPC8-210ENST00000582513 SLC20A2Q08357 652 aa18.61■□□□□ 0.57
TRAPPC8-210ENST00000582513 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 RGS12O14924 1447 aa18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 GEMIN8Q9NWZ8 242 aaKnown RBP18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 C3P01024 1663 aa18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC8-210ENST00000582513 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
TRAPPC8-210ENST00000582513 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
TRAPPC8-210ENST00000582513 ATP10DQ9P241 1426 aa18.59■□□□□ 0.57
TRAPPC8-210ENST00000582513 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
TRAPPC8-210ENST00000582513 SDSP20132 328 aa18.59■□□□□ 0.57
TRAPPC8-210ENST00000582513 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
TRAPPC8-210ENST00000582513 ITSN1Q15811 1721 aa18.58■□□□□ 0.57
TRAPPC8-210ENST00000582513 PLCB2Q00722 1185 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms