RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	KIF2C	Q99661	725 aa		14.87	□□□□□ -0.03
TMPO-212	ENST00000556029	OTUD7A	Q8TE49	926 aa	Predicted RBP	14.87	□□□□□ -0.03
TMPO-212	ENST00000556029	MEIS3	Q99687	375 aa		14.87	□□□□□ -0.03
TMPO-212	ENST00000556029	KCNA6	P17658	529 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	TAF7L	Q5H9L4	462 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	MET	P08581	1390 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	MYO5B	Q9ULV0	1848 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	CHMP4A	Q9BY43	222 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	CEP85	Q6P2H3	762 aa		14.86	□□□□□ -0.03
TMPO-212	ENST00000556029	BECN2	A8MW95	431 aa		14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	SDS	P20132	328 aa		14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	DDX54	Q8TDD1	881 aa	Known RBP	14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	HSPA2	P54652	639 aa		14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	TTC21B	Q7Z4L5	1316 aa		14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	A2ML1	A8K2U0	1454 aa		14.85	□□□□□ -0.03
TMPO-212	ENST00000556029	PTPRC	P08575	1304 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	PLEKHO1	Q53GL0	409 aa	Predicted RBP	14.84	□□□□□ -0.03
TMPO-212	ENST00000556029		F6X3S4	739 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	BAG4	O95429	457 aa	Known RBP	14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	ANKRD26	Q9UPS8	1709 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	KIF20B	Q96Q89	1820 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	CHL1	O00533	1208 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	PRDM11	Q9NQV5	511 aa		14.84	□□□□□ -0.03
TMPO-212	ENST00000556029	HTATSF1	O43719	755 aa	Known RBP	14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	DDIT3	P35638	169 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	FOSB	P53539	338 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	NEXN	Q0ZGT2	675 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	USP26	Q9BXU7	913 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	ANO2	Q9NQ90	1003 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	KIF24	Q5T7B8	1368 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	ERC2	O15083	957 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	NASP	P49321	788 aa	Predicted RBP	14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	RIC3	Q7Z5B4	369 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	R3HCC1	Q9Y3T6	440 aa	Known RBP	14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	CPSF1	Q10570	1443 aa	Known RBP	14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	MSH6	P52701	1360 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	ESPN	B1AK53	854 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	LTK	P29376	864 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	CCDC30	Q5VVM6	783 aa		14.83	□□□□□ -0.04
TMPO-212	ENST00000556029	NCOA3	Q9Y6Q9	1424 aa		14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	UBTFL1	P0CB47	393 aa	Predicted RBP	14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	CCT4	P50991	539 aa	Known RBP	14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	ZNF771	Q7L3S4	317 aa	Predicted RBP	14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	CAVIN1	Q6NZI2	390 aa	Known RBP	14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	TOM1L2	Q6ZVM7	507 aa		14.82	□□□□□ -0.04
TMPO-212	ENST00000556029		H3BQV1	296 aa		14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	IFFO2	Q5TF58	517 aa		14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	MPRIP	Q6WCQ1	1025 aa		14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	CLTC	Q00610	1675 aa	Known RBP	14.82	□□□□□ -0.04
TMPO-212	ENST00000556029	GNAI2	P04899	355 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029		A0A0U1RQG5	324 aa	Predicted RBP	14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	GOLGA6L19	H0YKK7	550 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	RBM10	P98175	930 aa	Known RBP	14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	EXOC6B	Q9Y2D4	811 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	VPS37C	A5D8V6	355 aa	Predicted RBP	14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	MYL6B	P14649	208 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	CLCN1	P35523	988 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	CWC22	Q9HCG8	908 aa	Known RBP	14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	DLC1	Q96QB1	1528 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	CDC42BPG	Q6DT37	1551 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	CHRNA2	Q15822	529 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	GAS2L3	Q86XJ1	694 aa		14.81	□□□□□ -0.04
TMPO-212	ENST00000556029	SURF6	O75683	361 aa	Known RBP	14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	NEK4	P51957	841 aa		14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	PRR36	Q9H6K5	1346 aa		14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	MAP2	P11137	1827 aa	Known RBP	14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	RICTOR	Q6R327	1708 aa		14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	PRPF40A	O75400	957 aa	Known RBP	14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	KLHL40	Q2TBA0	621 aa		14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	FAM184A	Q8NB25	1140 aa		14.8	□□□□□ -0.04
TMPO-212	ENST00000556029	TAT	P17735	454 aa	Predicted RBP	14.79	□□□□□ -0.04
TMPO-212	ENST00000556029	GNAT3	A8MTJ3	354 aa		14.79	□□□□□ -0.04
TMPO-212	ENST00000556029	RTL1	A6NKG5	1358 aa		14.79	□□□□□ -0.04
TMPO-212	ENST00000556029	NUTM2B	A6NNL0	878 aa	Predicted RBP	14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	NUTM2E	B1AL46	878 aa	Predicted RBP	14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	G2E3	Q7L622	706 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	ANXA1	P04083	346 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	TPM4	P67936	248 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	FAM177B	A6PVY3	158 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	PHF14	O94880	888 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	DDX58	O95786	925 aa	Known RBP	14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	CCDC173	Q0VFZ6	552 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	MTHFSD	Q2M296	383 aa	Known RBP	14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	TSHZ3	Q63HK5	1081 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	GPATCH3	Q96I76	525 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	LRRCC1	Q9C099	1032 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	CPS1	P31327	1500 aa		14.78	□□□□□ -0.04
TMPO-212	ENST00000556029	GNAI3	P08754	354 aa		14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	GTF2E1	P29083	439 aa	Predicted RBP	14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	GOLGA6L1	Q8N7Z2	621 aa		14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	KIAA0232	Q92628	1395 aa		14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	CABLES1	Q8TDN4	633 aa		14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	SIRT1	Q96EB6	747 aa		14.77	□□□□□ -0.04
TMPO-212	ENST00000556029	BTBD11	A6QL63	1104 aa		14.77	□□□□□ -0.05
TMPO-212	ENST00000556029	PATL2	C9JE40	543 aa	Known RBP	14.77	□□□□□ -0.05
TMPO-212	ENST00000556029	PDE1A	P54750	535 aa		14.77	□□□□□ -0.05
TMPO-212	ENST00000556029	KRT28	Q7Z3Y7	464 aa		14.77	□□□□□ -0.05
TMPO-212	ENST00000556029	HDAC5	Q9UQL6	1122 aa		14.77	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms