RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 TWISTNBQ3B726 338 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 TMEM51Q9NW97 253 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 CTNNA3Q9UI47 895 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 ADGRB3O60242 1522 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 ZFYVE16Q7Z3T8 1539 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 CAVIN2O95810 425 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 ZNF397Q8NF99 534 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 SRCIN1Q9C0H9 1055 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 LMTK2Q8IWU2 1503 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 KIF2AO00139 706 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 HCLS1P14317 486 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 ZNF830Q96NB3 372 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 NAP1L2Q9ULW6 460 aaPredicted RBP5.98□□□□□ -1.45
LMO3-229ENST00000543721 EFCAB6Q5THR3 1501 aa5.98□□□□□ -1.45
LMO3-229ENST00000543721 ADGRB1O14514 1584 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 HTATSF1O43719 755 aaKnown RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 ZNF853P0CG23 659 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 ZSCAN22P10073 491 aaPredicted RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 SLFNL1Q499Z3 407 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 HDGFL2Q7Z4V5 671 aaPredicted RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 AEBP1Q8IUX7 1158 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 TSC1Q92574 1164 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 ESYT1Q9BSJ8 1104 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 PTPRCP08575 1304 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 CCDC171Q6TFL3 1326 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 CPSF1Q10570 1443 aaKnown RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 NCBP1Q09161 790 aaKnown RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 FOXD4L5Q5VV16 416 aaPredicted RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 FAM200AQ8TCP9 573 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 FOXD4L4Q8WXT5 416 aaPredicted RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 KIF3BO15066 747 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 SLFN14P0C7P3 912 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 DHX8Q14562 1220 aaKnown RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 TERF2Q15554 542 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 CHMP4AQ9BY43 222 aa5.97□□□□□ -1.45
LMO3-229ENST00000543721 RPAP1Q9BWH6 1393 aaPredicted RBP5.97□□□□□ -1.45
LMO3-229ENST00000543721 AOX1Q06278 1338 aa5.96□□□□□ -1.45
LMO3-229ENST00000543721 TUBB4AP04350 444 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 CEP85Q6P2H3 762 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 OSCARQ8IYS5 282 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 FUCA2Q9BTY2 467 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 ATP7AQ04656 1500 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 FRMPD1Q5SYB0 1578 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 GADD45BO75293 160 aaPredicted RBP5.96□□□□□ -1.46
LMO3-229ENST00000543721 TNNT1P13805 278 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 PRKAR2BP31323 418 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 PDE1AP54750 535 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 PPLO60437 1756 aa5.96□□□□□ -1.46
LMO3-229ENST00000543721 KIF18AQ8NI77 898 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 ZSCAN31Q96LW9 406 aaPredicted RBP5.95□□□□□ -1.46
LMO3-229ENST00000543721 PYCARDQ9ULZ3 195 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 TULP4Q9NRJ4 1543 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 STX6O43752 255 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 CDC25BP30305 580 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 KCNJ4P48050 445 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 SMC3Q9UQE7 1217 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 ATP10DQ9P241 1426 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 LRRC7Q96NW7 1537 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 A0A1W2PP64 1363 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 FYB1O15117 783 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 F13A1P00488 732 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 BMS1Q14692 1282 aaKnown RBP5.95□□□□□ -1.46
LMO3-229ENST00000543721 MAP3K11Q16584 847 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 DRC7Q8IY82 874 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 C16orf71Q8IYS4 520 aaPredicted RBP5.95□□□□□ -1.46
LMO3-229ENST00000543721 ERO1AQ96HE7 468 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 GGNBP2Q9H3C7 697 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 MBIPQ9NS73 344 aa5.95□□□□□ -1.46
LMO3-229ENST00000543721 SPDYE2BA6NHP3 402 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 SPDYE6P0CI01 402 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 TPD52L1Q16890 204 aaPredicted RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 SPDYE2Q495Y8 402 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 TEX35Q5T0J7 233 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 C17orf53Q8N3J3 647 aaPredicted RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 RTF1Q92541 710 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 KCNF1Q9H3M0 494 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 ANO2Q9NQ90 1003 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 MROH2AA6NES4 1674 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 ZCCHC11Q5TAX3 1644 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 ZBTB7CA1YPR0 619 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 CHGAP10645 457 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 CCT4P50991 539 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 SH2B1Q9NRF2 756 aaPredicted RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 LIMCH1Q9UPQ0 1083 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 GLI2P10070 1586 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 KIAA0232Q92628 1395 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 CHMLP26374 656 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 SRPK2P78362 688 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 CEP135Q66GS9 1140 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 JARID2Q92833 1246 aaPredicted RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 NUP62CLQ9H1M0 184 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 DDX19AQ9NUU7 478 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 STAP2Q9UGK3 403 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 CNPY2Q9Y2B0 182 aa5.94□□□□□ -1.46
LMO3-229ENST00000543721 ARHGEF28Q8N1W1 1705 aaKnown RBP5.94□□□□□ -1.46
LMO3-229ENST00000543721 PDCP20941 246 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 HSPA4P34932 840 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 TAF7LQ5H9L4 462 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 TSPYL6Q8N831 410 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 SPC24Q8NBT2 197 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms