RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 KIF1BO60333 1816 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 DIP2BQ9P265 1576 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
GGA3-201ENST00000537686 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
GGA3-201ENST00000537686 TPM2P07951 284 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 TRIM27P14373 513 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
GGA3-201ENST00000537686 MRE11P49959 708 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 STK3Q13188 491 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 NSD2O96028 1365 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 METP08581 1390 aa12.03□□□□□ -0.48
GGA3-201ENST00000537686 XBP1P17861 261 aa12.02□□□□□ -0.48
GGA3-201ENST00000537686 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.48
GGA3-201ENST00000537686 CEP152O94986 1710 aa12.02□□□□□ -0.48
GGA3-201ENST00000537686 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.49
GGA3-201ENST00000537686 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
GGA3-201ENST00000537686 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
GGA3-201ENST00000537686 CEBPZQ03701 1054 aaKnown RBP12.01□□□□□ -0.49
GGA3-201ENST00000537686 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■□ 24.6
GGA3-201ENST00000537686 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 KIF1BPQ96EK5 621 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 SBNO2Q9Y2G9 1366 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 PPRC1Q5VV67 1664 aaKnown RBP12.01□□□□□ -0.49
GGA3-201ENST00000537686 LMTK2Q8IWU2 1503 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 STK11IPQ8N1F8 1099 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
GGA3-201ENST00000537686 BCORL1Q5H9F3 1711 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 GLI2P10070 1586 aa12.01□□□□□ -0.49
GGA3-201ENST00000537686 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
GGA3-201ENST00000537686 UPF3BQ9BZI7 483 aaKnown RBP12.01□□□□□ -0.49
GGA3-201ENST00000537686 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
GGA3-201ENST00000537686 BRMS1Q9HCU9 246 aa12□□□□□ -0.49
GGA3-201ENST00000537686 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
GGA3-201ENST00000537686 IKQ13123 557 aaPredicted RBP12□□□□□ -0.49
GGA3-201ENST00000537686 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
GGA3-201ENST00000537686 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
GGA3-201ENST00000537686 STARD3NLO95772 234 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 HSP90AB2PQ58FF8 381 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
GGA3-201ENST00000537686 MX1P20591 662 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 CWC22Q9HCG8 908 aaKnown RBP11.99□□□□□ -0.49
GGA3-201ENST00000537686 STK38Q15208 465 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 NACAP1Q9BZK3 213 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
GGA3-201ENST00000537686 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 FLIIQ13045 1269 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 ANKRD1Q15327 319 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 DBF4Q9UBU7 674 aaPredicted RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 KRT28Q7Z3Y7 464 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 FAM43AQ8N2R8 423 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 GOLGA6L1Q8N7Z2 621 aa11.98□□□□□ -0.49
GGA3-201ENST00000537686 CCDC43Q96MW1 224 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 LRRFIP2Q9Y608 721 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
GGA3-201ENST00000537686 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
GGA3-201ENST00000537686 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 A2ML1A8K2U0 1454 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 MYD88Q99836 296 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
GGA3-201ENST00000537686 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
GGA3-201ENST00000537686 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
GGA3-201ENST00000537686 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
GGA3-201ENST00000537686 MBIPQ9NS73 344 aa11.96□□□□□ -0.49
GGA3-201ENST00000537686 ANXA1P04083 346 aa11.96□□□□□ -0.49
GGA3-201ENST00000537686 POLR3AO14802 1390 aaPredicted RBP11.96□□□□□ -0.49
GGA3-201ENST00000537686 KRT85P78386 507 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 HSP90AA2PQ14568 343 aaPredicted RBP11.96□□□□□ -0.5
GGA3-201ENST00000537686 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.5
GGA3-201ENST00000537686 ABCF2Q9UG63 623 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 FRMPD1Q5SYB0 1578 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 ADGRB3O60242 1522 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 MCM4P33991 863 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 CHRNA2Q15822 529 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 METTL24Q5JXM2 366 aa11.96□□□□□ -0.5
GGA3-201ENST00000537686 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 TRIM22Q8IYM9 498 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 PDRG1Q9NUG6 133 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 ATP2B2Q01814 1243 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 ZSCAN25Q6NSZ9 544 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 ME1P48163 572 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
GGA3-201ENST00000537686 ZNF396Q96N95 335 aaPredicted RBP11.95□□□□□ -0.5
GGA3-201ENST00000537686 CCDC8Q9H0W5 538 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms