RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 CCDC47Q96A33 483 aaKnown RBP18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 MYD88Q99836 296 aa18.21■□□□□ 0.51
PCDHA3-202ENST00000532566 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.5
PCDHA3-202ENST00000532566 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 STK38Q15208 465 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 BOLA2Q9H3K6 86 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 CEBPZQ03701 1054 aaKnown RBP18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 KRT28Q7Z3Y7 464 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 PTPRTO14522 1441 aa18.2■□□□□ 0.5
PCDHA3-202ENST00000532566 TPM2P07951 284 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 CCDC192P0DO97 292 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 BRMS1Q9HCU9 246 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 FAM13BQ9NYF5 915 aa18.19■□□□□ 0.5
PCDHA3-202ENST00000532566 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 FLT4P35916 1363 aa18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 RRP12Q5JTH9 1297 aaKnown RBP18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 SSFA2P28290 1259 aa18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
PCDHA3-202ENST00000532566 MYO5CQ9NQX4 1742 aa18.17■□□□□ 0.5
PCDHA3-202ENST00000532566 ECHDC1Q9NTX5 307 aa18.17■□□□□ 0.5
PCDHA3-202ENST00000532566 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
PCDHA3-202ENST00000532566 STARD3NLO95772 234 aa18.17■□□□□ 0.5
PCDHA3-202ENST00000532566 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 GNL3LQ9NVN8 582 aaKnown RBP18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 MAP3K2Q9Y2U5 619 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 RAD21O60216 631 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 KDM4AO75164 1064 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 TNMDQ9H2S6 317 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 CCAR2Q8N163 923 aaKnown RBP18.16■□□□□ 0.5
PCDHA3-202ENST00000532566 SDSP20132 328 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 CCDC85AQ96PX6 553 aaPredicted RBP18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 IPO7O95373 1038 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 ATP2B1P20020 1258 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 ANXA1P04083 346 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 ME1P48163 572 aa18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 SH2B1Q9NRF2 756 aaPredicted RBP18.15■□□□□ 0.5
PCDHA3-202ENST00000532566 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.5
PCDHA3-202ENST00000532566 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 KDM5CP41229 1560 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 A0A087WZG4 1122 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 ATP10AO60312 1499 aa18.14■□□□□ 0.49
PCDHA3-202ENST00000532566 ESPNB1AK53 854 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 LIMCH1Q9UPQ0 1083 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 PDE1AP54750 535 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 RHPN1Q8TCX5 695 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
PCDHA3-202ENST00000532566 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 DCTPP1Q9H773 170 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 KRT24Q2M2I5 525 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 SYCE3A1L190 88 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 FERMT3Q86UX7 667 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 KDM2BQ8NHM5 1336 aa18.12■□□□□ 0.49
PCDHA3-202ENST00000532566 SLC3A2P08195 630 aaKnown RBP18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 EDC4Q6P2E9 1401 aaKnown RBP18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 GOLGA6L1Q8N7Z2 621 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 PCMTD1Q96MG8 357 aaPredicted RBP18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 NUP62CLQ9H1M0 184 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 CHPF2Q9P2E5 772 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 METTL24Q5JXM2 366 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 IFIT1P09914 478 aaKnown RBP18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 EYA1Q99502 592 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
PCDHA3-202ENST00000532566 IDH1O75874 414 aaKnown RBP18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 NOC3LQ8WTT2 800 aaKnown RBP18.1■□□□□ 0.49
PCDHA3-202ENST00000532566 ATP8B2P98198 1209 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms