RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 BCL11BQ9C0K0 894 aaPredicted RBP19.89■□□□□ 0.77
PDCD6-211ENST00000515587 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
PDCD6-211ENST00000515587 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
PDCD6-211ENST00000515587 CASZ1Q86V15 1759 aa19.88■□□□□ 0.77
PDCD6-211ENST00000515587 ERVV-2B6SEH9 535 aa19.87■□□□□ 0.77
PDCD6-211ENST00000515587 BTAF1O14981 1849 aa19.87■□□□□ 0.77
PDCD6-211ENST00000515587 KDM6AO15550 1401 aaPredicted RBP19.86■□□□□ 0.77
PDCD6-211ENST00000515587 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
PDCD6-211ENST00000515587 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
PDCD6-211ENST00000515587 ADAMTS7Q9UKP4 1686 aa19.85■□□□□ 0.77
PDCD6-211ENST00000515587 RNMTO43148 476 aaKnown RBP19.85■□□□□ 0.77
PDCD6-211ENST00000515587 TMPOP42166 694 aaKnown RBP19.85■□□□□ 0.77
PDCD6-211ENST00000515587 LMOD3Q0VAK6 560 aa19.85■□□□□ 0.77
PDCD6-211ENST00000515587 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
PDCD6-211ENST00000515587 RIPK4P57078 832 aa19.84■□□□□ 0.77
PDCD6-211ENST00000515587 CABP4P57796 275 aa19.84■□□□□ 0.77
PDCD6-211ENST00000515587 PLSCR1O15162 318 aa19.83■□□□□ 0.77
PDCD6-211ENST00000515587 GIGYF1O75420 1035 aaPredicted RBP19.83■□□□□ 0.77
PDCD6-211ENST00000515587 TEFQ10587 303 aa19.83■□□□□ 0.77
PDCD6-211ENST00000515587 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
PDCD6-211ENST00000515587 PROM2Q8N271 834 aa19.83■□□□□ 0.77
PDCD6-211ENST00000515587 LGR6Q9HBX8 967 aa19.83■□□□□ 0.77
PDCD6-211ENST00000515587 APAF1O14727 1248 aa19.82■□□□□ 0.76
PDCD6-211ENST00000515587 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
PDCD6-211ENST00000515587 MCM10Q7L590 875 aa19.8■□□□□ 0.76
PDCD6-211ENST00000515587 IL17REQ8NFR9 667 aa19.8■□□□□ 0.76
PDCD6-211ENST00000515587 PIGBQ92521 554 aa19.8■□□□□ 0.76
PDCD6-211ENST00000515587 SLC52A2Q9HAB3 445 aa19.8■□□□□ 0.76
PDCD6-211ENST00000515587 RGPD3A6NKT7 1758 aaPredicted RBP19.8■□□□□ 0.76
PDCD6-211ENST00000515587 RGPD4Q7Z3J3 1758 aa19.8■□□□□ 0.76
PDCD6-211ENST00000515587 MRC1P22897 1456 aa19.79■□□□□ 0.76
PDCD6-211ENST00000515587 NFATC2IPQ8NCF5 419 aa19.79■□□□□ 0.76
PDCD6-211ENST00000515587 SIPA1L3O60292 1781 aaPredicted RBP19.79■□□□□ 0.76
PDCD6-211ENST00000515587 CEP350Q5VT06 3117 aa19.79■□□□□ 0.76
PDCD6-211ENST00000515587 CEMIPQ8WUJ3 1361 aa19.79■□□□□ 0.76
PDCD6-211ENST00000515587 CHD4Q14839 1912 aa19.78■□□□□ 0.76
PDCD6-211ENST00000515587 DCTN1Q14203 1278 aa19.78■□□□□ 0.76
PDCD6-211ENST00000515587 SMARCC1Q92922 1105 aaPredicted RBP19.78■□□□□ 0.76
PDCD6-211ENST00000515587 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
PDCD6-211ENST00000515587 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
PDCD6-211ENST00000515587 MTFR1LQ9H019 292 aa19.75■□□□□ 0.75
PDCD6-211ENST00000515587 LY75O60449 1722 aa19.75■□□□□ 0.75
PDCD6-211ENST00000515587 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
PDCD6-211ENST00000515587 STK32BQ9NY57 414 aa19.74■□□□□ 0.75
PDCD6-211ENST00000515587 TRIM35Q9UPQ4 493 aa19.74■□□□□ 0.75
PDCD6-211ENST00000515587 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
PDCD6-211ENST00000515587 PALLDQ8WX93 1383 aa19.73■□□□□ 0.75
PDCD6-211ENST00000515587 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
PDCD6-211ENST00000515587 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
PDCD6-211ENST00000515587 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
PDCD6-211ENST00000515587 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
PDCD6-211ENST00000515587 ASAP1Q9ULH1 1129 aa19.73■□□□□ 0.75
PDCD6-211ENST00000515587 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 GPR162Q16538 588 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 ARXQ96QS3 562 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 ATG3Q9NT62 314 aa19.72■□□□□ 0.75
PDCD6-211ENST00000515587 CCDC27Q2M243 656 aa19.71■□□□□ 0.75
PDCD6-211ENST00000515587 HMGB2P26583 209 aaKnown RBP19.7■□□□□ 0.74
PDCD6-211ENST00000515587 SLC27A3Q5K4L6 730 aa19.7■□□□□ 0.74
PDCD6-211ENST00000515587 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
PDCD6-211ENST00000515587 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
PDCD6-211ENST00000515587 UBR2Q8IWV8 1755 aa19.69■□□□□ 0.74
PDCD6-211ENST00000515587 KDM3BQ7LBC6 1761 aa19.68■□□□□ 0.74
PDCD6-211ENST00000515587 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
PDCD6-211ENST00000515587 ZNF790Q6PG37 636 aa19.68■□□□□ 0.74
PDCD6-211ENST00000515587 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
PDCD6-211ENST00000515587 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
PDCD6-211ENST00000515587 LOC102724428A0A0B4J2F2 783 aa19.67■□□□□ 0.74
PDCD6-211ENST00000515587 PTCD1O75127 700 aaKnown RBP19.67■□□□□ 0.74
PDCD6-211ENST00000515587 SIK1P57059 783 aa19.67■□□□□ 0.74
PDCD6-211ENST00000515587 WWC1Q8IX03 1113 aa19.67■□□□□ 0.74
PDCD6-211ENST00000515587 LAS1LQ9Y4W2 734 aaKnown RBP19.67■□□□□ 0.74
PDCD6-211ENST00000515587 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
PDCD6-211ENST00000515587 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
PDCD6-211ENST00000515587 C5P01031 1676 aa19.65■□□□□ 0.74
PDCD6-211ENST00000515587 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
PDCD6-211ENST00000515587 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
PDCD6-211ENST00000515587 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
PDCD6-211ENST00000515587 FMNL2Q96PY5 1086 aa19.65■□□□□ 0.74
PDCD6-211ENST00000515587 MIS18AQ9NYP9 233 aa19.65■□□□□ 0.74
PDCD6-211ENST00000515587 GNAI1P63096 354 aa19.64■□□□□ 0.73
PDCD6-211ENST00000515587 KCPQ6ZWJ8 1503 aa19.64■□□□□ 0.73
PDCD6-211ENST00000515587 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
PDCD6-211ENST00000515587 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
PDCD6-211ENST00000515587 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
PDCD6-211ENST00000515587 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
PDCD6-211ENST00000515587 IL16Q14005 1332 aa19.62■□□□□ 0.73
PDCD6-211ENST00000515587 CHL1O00533 1208 aa19.62■□□□□ 0.73
PDCD6-211ENST00000515587 VSIG10Q8N0Z9 540 aa19.62■□□□□ 0.73
PDCD6-211ENST00000515587 CICQ96RK0 1608 aaPredicted RBP19.62■□□□□ 0.73
PDCD6-211ENST00000515587 KCNQ3O43525 872 aa19.61■□□□□ 0.73
PDCD6-211ENST00000515587 KCNQ4P56696 695 aa19.61■□□□□ 0.73
PDCD6-211ENST00000515587 HNRNPUQ00839 825 aaKnown RBP eCLIP19.61■□□□□ 0.73
PDCD6-211ENST00000515587 ZNF496Q96IT1 587 aaPredicted RBP19.61■□□□□ 0.73
PDCD6-211ENST00000515587 LRRC4BQ9NT99 713 aa19.61■□□□□ 0.73
PDCD6-211ENST00000515587 TJP1Q07157 1748 aa19.61■□□□□ 0.73
PDCD6-211ENST00000515587 HEG1Q9ULI3 1381 aa19.6■□□□□ 0.73
PDCD6-211ENST00000515587 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms