RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 PDCP20941 246 aa19.68■□□□□ 0.74
ITGA3-204ENST00000505306 SMARCC1Q92922 1105 aaPredicted RBP19.68■□□□□ 0.74
ITGA3-204ENST00000505306 ZNF287Q9HBT7 754 aa19.68■□□□□ 0.74
ITGA3-204ENST00000505306 SNRPA1P09661 255 aaKnown RBP19.67■□□□□ 0.74
ITGA3-204ENST00000505306 NUTM1Q86Y26 1132 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 STK3Q13188 491 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 TMEM57Q8N5G2 664 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 CDC5LQ99459 802 aaKnown RBP19.67■□□□□ 0.74
ITGA3-204ENST00000505306 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 F6X3S4 739 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 NBPF14Q5TI25 921 aa19.67■□□□□ 0.74
ITGA3-204ENST00000505306 HSP90AB2PQ58FF8 381 aa19.66■□□□□ 0.74
ITGA3-204ENST00000505306 CWC27Q6UX04 472 aaKnown RBP19.66■□□□□ 0.74
ITGA3-204ENST00000505306 FBLN1P23142 703 aa19.66■□□□□ 0.74
ITGA3-204ENST00000505306 KIF1BPQ96EK5 621 aa19.66■□□□□ 0.74
ITGA3-204ENST00000505306 NSD2O96028 1365 aa19.66■□□□□ 0.74
ITGA3-204ENST00000505306 UHRF1BP1Q6BDS2 1440 aa19.66■□□□□ 0.74
ITGA3-204ENST00000505306 CCAR2Q8N163 923 aaKnown RBP19.66■□□□□ 0.74
ITGA3-204ENST00000505306 RBM10P98175 930 aaKnown RBP19.65■□□□□ 0.74
ITGA3-204ENST00000505306 ATP5J2-PTCD1G3V325 749 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 OLFM4Q6UX06 510 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 OFD1O75665 1012 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 SLFN5Q08AF3 891 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 ZNF592Q92610 1267 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 MKNK2Q9HBH9 465 aa19.65■□□□□ 0.74
ITGA3-204ENST00000505306 ABCC2Q92887 1545 aa19.64■□□□□ 0.74
ITGA3-204ENST00000505306 MCM2P49736 904 aa19.64■□□□□ 0.74
ITGA3-204ENST00000505306 CHD1LQ86WJ1 897 aa19.64■□□□□ 0.74
ITGA3-204ENST00000505306 RRP9O43818 475 aaKnown RBP19.64■□□□□ 0.73
ITGA3-204ENST00000505306 IL2RBP14784 551 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 ANKRD1Q15327 319 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 CCDC39Q9UFE4 941 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 MINDY4BA8MYZ0 360 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
ITGA3-204ENST00000505306 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 MAP3K12Q12852 859 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 CWC25Q9NXE8 425 aaPredicted RBP19.63■□□□□ 0.73
ITGA3-204ENST00000505306 ODF2Q5BJF6 829 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 WDR78Q5VTH9 848 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 PIBF1Q8WXW3 757 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 GRPEL1Q9HAV7 217 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 ZNF76P36508 570 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 STK38Q15208 465 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 TFCP2L1Q9NZI6 479 aa19.63■□□□□ 0.73
ITGA3-204ENST00000505306 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 POLD1P28340 1107 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 RABEP1Q15276 862 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 IMMTQ16891 758 aaKnown RBP19.62■□□□□ 0.73
ITGA3-204ENST00000505306 MAP3K2Q9Y2U5 619 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 SSH1Q8WYL5 1049 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 SETDB2Q96T68 719 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 LDHAL6AQ6ZMR3 332 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 FLIIQ13045 1269 aa19.62■□□□□ 0.73
ITGA3-204ENST00000505306 ZHX3Q9H4I2 956 aa19.61■□□□□ 0.73
ITGA3-204ENST00000505306 CAVIN1Q6NZI2 390 aaKnown RBP19.61■□□□□ 0.73
ITGA3-204ENST00000505306 RNF214Q8ND24 703 aa19.61■□□□□ 0.73
ITGA3-204ENST00000505306 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
ITGA3-204ENST00000505306 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
ITGA3-204ENST00000505306 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
ITGA3-204ENST00000505306 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
ITGA3-204ENST00000505306 RAB11FIP3O75154 756 aa19.6■□□□□ 0.73
ITGA3-204ENST00000505306 CEBPZQ03701 1054 aaKnown RBP19.6■□□□□ 0.73
ITGA3-204ENST00000505306 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
ITGA3-204ENST00000505306 ESPNB1AK53 854 aa19.6■□□□□ 0.73
ITGA3-204ENST00000505306 TBX22Q9Y458 520 aa19.6■□□□□ 0.73
ITGA3-204ENST00000505306 FAM83GA6ND36 823 aa19.6■□□□□ 0.73
ITGA3-204ENST00000505306 NAP1L1P55209 391 aaKnown RBP19.6■□□□□ 0.73
ITGA3-204ENST00000505306 SETQ01105 290 aaPredicted RBP19.6■□□□□ 0.73
ITGA3-204ENST00000505306 ZFYVE27Q5T4F4 411 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 CDKL5O76039 1030 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 GLRX3O76003 335 aaKnown RBP19.59■□□□□ 0.73
ITGA3-204ENST00000505306 CCDC70Q6NSX1 233 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 NAPBQ9H115 298 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 BTG4Q9NY30 223 aa19.59■□□□□ 0.73
ITGA3-204ENST00000505306 LRRFIP2Q9Y608 721 aaKnown RBP19.59■□□□□ 0.73
ITGA3-204ENST00000505306 JMYQ8N9B5 988 aa19.58■□□□□ 0.73
ITGA3-204ENST00000505306 KINO60870 393 aaKnown RBP19.58■□□□□ 0.73
ITGA3-204ENST00000505306 SLC39A6Q13433 755 aa19.58■□□□□ 0.73
ITGA3-204ENST00000505306 CCDC8Q9H0W5 538 aaPredicted RBP19.58■□□□□ 0.73
ITGA3-204ENST00000505306 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.73
ITGA3-204ENST00000505306 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.72
ITGA3-204ENST00000505306 C11orf95C9JLR9 678 aaPredicted RBP19.58■□□□□ 0.72
ITGA3-204ENST00000505306 KRT32Q14532 448 aa19.58■□□□□ 0.72
ITGA3-204ENST00000505306 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.72
ITGA3-204ENST00000505306 GCP02774 474 aa19.58■□□□□ 0.72
ITGA3-204ENST00000505306 MCM4P33991 863 aa19.58■□□□□ 0.72
ITGA3-204ENST00000505306 ANXA1P04083 346 aa19.57■□□□□ 0.72
ITGA3-204ENST00000505306 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
ITGA3-204ENST00000505306 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
ITGA3-204ENST00000505306 RPRD2Q5VT52 1461 aaKnown RBP19.57■□□□□ 0.72
ITGA3-204ENST00000505306 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
ITGA3-204ENST00000505306 IBSPP21815 317 aaPredicted RBP19.56■□□□□ 0.72
ITGA3-204ENST00000505306 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 ZNF444Q8N0Y2 327 aaPredicted RBP19.56■□□□□ 0.72
ITGA3-204ENST00000505306 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 PI4KAP2A4QPH2 592 aa19.56■□□□□ 0.72
ITGA3-204ENST00000505306 PI4KAP1Q8N8J0 262 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms