RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
PRDM5-204ENST00000502409 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
PRDM5-204ENST00000502409 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
PRDM5-204ENST00000502409 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
PRDM5-204ENST00000502409 MRC1P22897 1456 aa16.41■□□□□ 0.22
PRDM5-204ENST00000502409 PLSCR1O15162 318 aa16.4■□□□□ 0.22
PRDM5-204ENST00000502409 APBA3O96018 575 aa16.39■□□□□ 0.21
PRDM5-204ENST00000502409 HMGB2P26583 209 aaKnown RBP16.39■□□□□ 0.21
PRDM5-204ENST00000502409 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
PRDM5-204ENST00000502409 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
PRDM5-204ENST00000502409 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
PRDM5-204ENST00000502409 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
PRDM5-204ENST00000502409 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
PRDM5-204ENST00000502409 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
PRDM5-204ENST00000502409 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
PRDM5-204ENST00000502409 DLG5Q8TDM6 1919 aa16.38■□□□□ 0.21
PRDM5-204ENST00000502409 RNMTO43148 476 aaKnown RBP16.37■□□□□ 0.21
PRDM5-204ENST00000502409 KCNQ2O43526 872 aa16.37■□□□□ 0.21
PRDM5-204ENST00000502409 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
PRDM5-204ENST00000502409 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
PRDM5-204ENST00000502409 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
PRDM5-204ENST00000502409 CABP4P57796 275 aa16.36■□□□□ 0.21
PRDM5-204ENST00000502409 RREB1Q92766 1687 aa16.36■□□□□ 0.21
PRDM5-204ENST00000502409 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
PRDM5-204ENST00000502409 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
PRDM5-204ENST00000502409 LY75O60449 1722 aa16.35■□□□□ 0.21
PRDM5-204ENST00000502409 SIPA1L3O60292 1781 aaPredicted RBP16.34■□□□□ 0.21
PRDM5-204ENST00000502409 TEFQ10587 303 aa16.34■□□□□ 0.21
PRDM5-204ENST00000502409 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
PRDM5-204ENST00000502409 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
PRDM5-204ENST00000502409 PIGBQ92521 554 aa16.34■□□□□ 0.21
PRDM5-204ENST00000502409 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
PRDM5-204ENST00000502409 CAMKK2Q96RR4 588 aa16.33■□□□□ 0.2
PRDM5-204ENST00000502409 LGR6Q9HBX8 967 aa16.33■□□□□ 0.2
PRDM5-204ENST00000502409 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
PRDM5-204ENST00000502409 RIPK4P57078 832 aa16.32■□□□□ 0.2
PRDM5-204ENST00000502409 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
PRDM5-204ENST00000502409 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
PRDM5-204ENST00000502409 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
PRDM5-204ENST00000502409 PTF1AQ7RTS3 328 aa16.32■□□□□ 0.2
PRDM5-204ENST00000502409 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
PRDM5-204ENST00000502409 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
PRDM5-204ENST00000502409 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
PRDM5-204ENST00000502409 MIER1Q8N108 512 aa16.31■□□□□ 0.2
PRDM5-204ENST00000502409 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
PRDM5-204ENST00000502409 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
PRDM5-204ENST00000502409 NUP188Q5SRE5 1749 aa16.3■□□□□ 0.2
PRDM5-204ENST00000502409 APAF1O14727 1248 aa16.29■□□□□ 0.2
PRDM5-204ENST00000502409 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
PRDM5-204ENST00000502409 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
PRDM5-204ENST00000502409 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
PRDM5-204ENST00000502409 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 MCM10Q7L590 875 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
PRDM5-204ENST00000502409 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
PRDM5-204ENST00000502409 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.2
PRDM5-204ENST00000502409 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
PRDM5-204ENST00000502409 BTBD11A6QL63 1104 aa16.26■□□□□ 0.19
PRDM5-204ENST00000502409 TTC5Q8N0Z6 440 aa16.26■□□□□ 0.19
PRDM5-204ENST00000502409 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
PRDM5-204ENST00000502409 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
PRDM5-204ENST00000502409 C5P01031 1676 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 SIK1P57059 783 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 ZNF790Q6PG37 636 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 TRIM35Q9UPQ4 493 aa16.25■□□□□ 0.19
PRDM5-204ENST00000502409 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
PRDM5-204ENST00000502409 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 PROM2Q8N271 834 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
PRDM5-204ENST00000502409 ZBTB22O15209 634 aa16.22■□□□□ 0.19
PRDM5-204ENST00000502409 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
PRDM5-204ENST00000502409 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
PRDM5-204ENST00000502409 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
PRDM5-204ENST00000502409 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.19
PRDM5-204ENST00000502409 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
PRDM5-204ENST00000502409 IL16Q14005 1332 aa16.2■□□□□ 0.18
PRDM5-204ENST00000502409 C4BP0C0L5 1744 aa16.2■□□□□ 0.18
PRDM5-204ENST00000502409 TJP1Q07157 1748 aa16.2■□□□□ 0.18
PRDM5-204ENST00000502409 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
PRDM5-204ENST00000502409 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
PRDM5-204ENST00000502409 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
PRDM5-204ENST00000502409 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
PRDM5-204ENST00000502409 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
PRDM5-204ENST00000502409 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
PRDM5-204ENST00000502409 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
PRDM5-204ENST00000502409 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
PRDM5-204ENST00000502409 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
PRDM5-204ENST00000502409 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
PRDM5-204ENST00000502409 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
PRDM5-204ENST00000502409 GNAI1P63096 354 aa16.18■□□□□ 0.18
PRDM5-204ENST00000502409 WDR63Q8IWG1 891 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms