RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
TRAIP-205ENST00000475495 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
TRAIP-205ENST00000475495 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
TRAIP-205ENST00000475495 CAMKK2Q96RR4 588 aa13.38□□□□□ -0.27
TRAIP-205ENST00000475495 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
TRAIP-205ENST00000475495 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
TRAIP-205ENST00000475495 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
TRAIP-205ENST00000475495 NEFLP07196 543 aa13.37□□□□□ -0.27
TRAIP-205ENST00000475495 CABP4P57796 275 aa13.37□□□□□ -0.27
TRAIP-205ENST00000475495 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
TRAIP-205ENST00000475495 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
TRAIP-205ENST00000475495 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
TRAIP-205ENST00000475495 EZH2Q15910 746 aaKnown RBP13.36□□□□□ -0.27
TRAIP-205ENST00000475495 PIGBQ92521 554 aa13.36□□□□□ -0.27
TRAIP-205ENST00000475495 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
TRAIP-205ENST00000475495 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
TRAIP-205ENST00000475495 RUNDC1Q96C34 613 aa13.36□□□□□ -0.27
TRAIP-205ENST00000475495 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
TRAIP-205ENST00000475495 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
TRAIP-205ENST00000475495 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
TRAIP-205ENST00000475495 PNISRQ8TF01 805 aaKnown RBP13.35□□□□□ -0.27
TRAIP-205ENST00000475495 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
TRAIP-205ENST00000475495 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
TRAIP-205ENST00000475495 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
TRAIP-205ENST00000475495 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
TRAIP-205ENST00000475495 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
TRAIP-205ENST00000475495 RREB1Q92766 1687 aa13.34□□□□□ -0.27
TRAIP-205ENST00000475495 LY75O60449 1722 aa13.33□□□□□ -0.27
TRAIP-205ENST00000475495 TEFQ10587 303 aa13.33□□□□□ -0.28
TRAIP-205ENST00000475495 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
TRAIP-205ENST00000475495 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
TRAIP-205ENST00000475495 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
TRAIP-205ENST00000475495 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
TRAIP-205ENST00000475495 MRC1P22897 1456 aa13.32□□□□□ -0.28
TRAIP-205ENST00000475495 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
TRAIP-205ENST00000475495 PROM2Q8N271 834 aa13.32□□□□□ -0.28
TRAIP-205ENST00000475495 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
TRAIP-205ENST00000475495 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
TRAIP-205ENST00000475495 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
TRAIP-205ENST00000475495 SIPA1L3O60292 1781 aaPredicted RBP13.31□□□□□ -0.28
TRAIP-205ENST00000475495 RIPK4P57078 832 aa13.31□□□□□ -0.28
TRAIP-205ENST00000475495 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
TRAIP-205ENST00000475495 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
TRAIP-205ENST00000475495 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
TRAIP-205ENST00000475495 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
TRAIP-205ENST00000475495 MCM10Q7L590 875 aa13.3□□□□□ -0.28
TRAIP-205ENST00000475495 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-205ENST00000475495 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
TRAIP-205ENST00000475495 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 APAF1O14727 1248 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 SIK1P57059 783 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAIP-205ENST00000475495 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 NEUROD2Q15784 382 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 FAM9BQ8IZU0 186 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
TRAIP-205ENST00000475495 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
TRAIP-205ENST00000475495 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
TRAIP-205ENST00000475495 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
TRAIP-205ENST00000475495 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
TRAIP-205ENST00000475495 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
TRAIP-205ENST00000475495 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
TRAIP-205ENST00000475495 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
TRAIP-205ENST00000475495 PAPPAQ13219 1627 aa13.26□□□□□ -0.29
TRAIP-205ENST00000475495 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
TRAIP-205ENST00000475495 ZBED9Q6R2W3 1325 aa13.26□□□□□ -0.29
TRAIP-205ENST00000475495 C5P01031 1676 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
TRAIP-205ENST00000475495 KCNQ4P56696 695 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 ERICH6BQ5W0A0 696 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
TRAIP-205ENST00000475495 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
TRAIP-205ENST00000475495 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
TRAIP-205ENST00000475495 LRP5O75197 1615 aa13.24□□□□□ -0.29
TRAIP-205ENST00000475495 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
TRAIP-205ENST00000475495 SLC15A2Q16348 729 aa13.23□□□□□ -0.29
TRAIP-205ENST00000475495 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
TRAIP-205ENST00000475495 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
TRAIP-205ENST00000475495 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
TRAIP-205ENST00000475495 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
TRAIP-205ENST00000475495 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
TRAIP-205ENST00000475495 KCPQ6ZWJ8 1503 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
TRAIP-205ENST00000475495 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-205ENST00000475495 ITPK1Q13572 414 aa13.21□□□□□ -0.29
TRAIP-205ENST00000475495 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-205ENST00000475495 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
TRAIP-205ENST00000475495 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.29
TRAIP-205ENST00000475495 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
TRAIP-205ENST00000475495 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
TRAIP-205ENST00000475495 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.3
TRAIP-205ENST00000475495 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
TRAIP-205ENST00000475495 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms