RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 NAPBQ9H115 298 aa16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 STK3Q13188 491 aa16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
SMARCA2-214ENST00000450198 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.38e-9■■■■■ 47.5
SMARCA2-214ENST00000450198 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 TAX1BP1Q86VP1 789 aa16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 GSTO1P78417 241 aa16.9■□□□□ 0.3
SMARCA2-214ENST00000450198 LIG1P18858 919 aa16.89■□□□□ 0.29
SMARCA2-214ENST00000450198 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
SMARCA2-214ENST00000450198 NCBP1Q09161 790 aaKnown RBP16.89■□□□□ 0.29
SMARCA2-214ENST00000450198 PDIA4P13667 645 aaKnown RBP16.89■□□□□ 0.29
SMARCA2-214ENST00000450198 TSPYL1Q9H0U9 437 aa16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 NUDT16Q96DE0 195 aaKnown RBP16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 KIF4AO95239 1232 aa16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
SMARCA2-214ENST00000450198 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 TAF12Q16514 161 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 MSH6P52701 1360 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
SMARCA2-214ENST00000450198 KRT85P78386 507 aa16.86■□□□□ 0.29
SMARCA2-214ENST00000450198 CCDC117Q8IWD4 279 aaPredicted RBP16.86■□□□□ 0.29
SMARCA2-214ENST00000450198 SAMM50Q9Y512 469 aa16.86■□□□□ 0.29
SMARCA2-214ENST00000450198 CWC15Q9P013 229 aaKnown RBP16.86■□□□□ 0.29
SMARCA2-214ENST00000450198 FKBP15Q5T1M5 1219 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 PARP3Q9Y6F1 533 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 CTNNA2P26232 953 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 CCDC194A0A1B0GVG4 234 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 FIBPO43427 364 aa16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
SMARCA2-214ENST00000450198 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 PDE4BQ07343 736 aa16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 MYD88Q99836 296 aa16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 FOXO3O43524 673 aa16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 HSP90AA2PQ14568 343 aaPredicted RBP16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
SMARCA2-214ENST00000450198 KIF5BP33176 963 aa16.83■□□□□ 0.29
SMARCA2-214ENST00000450198 GIGYF2Q6Y7W6 1299 aaKnown RBP16.83■□□□□ 0.29
SMARCA2-214ENST00000450198 CKAP2LQ8IYA6 745 aa16.83■□□□□ 0.29
SMARCA2-214ENST00000450198 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-214ENST00000450198 RGS22Q8NE09 1264 aa16.83■□□□□ 0.28
SMARCA2-214ENST00000450198 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.28
SMARCA2-214ENST00000450198 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 C8orf37Q96NL8 207 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 KIAA1328Q86T90 577 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 NOB1Q9ULX3 412 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
SMARCA2-214ENST00000450198 USP37Q86T82 979 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 SLC12A5Q9H2X9 1139 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 ERLIN1O75477 346 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 SMTNL1A8MU46 457 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 FCHSD2O94868 740 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 TSNARE1Q96NA8 513 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 PSMD1Q99460 953 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 BICD1Q96G01 975 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 CACNA2D4Q7Z3S7 1137 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 ZNF354CQ86Y25 554 aa16.81■□□□□ 0.28
SMARCA2-214ENST00000450198 LPXNO60711 386 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 CCDC174Q6PII3 467 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 TFCP2L1Q9NZI6 479 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 ZBTB24O43167 697 aaPredicted RBP16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 SPA17Q15506 151 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
SMARCA2-214ENST00000450198 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
SMARCA2-214ENST00000450198 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms