RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MRC1P22897 1456 aa19.03■□□□□ 0.64
TNFRSF1A-204ENST00000440083 LY75O60449 1722 aa19.03■□□□□ 0.64
TNFRSF1A-204ENST00000440083 ERVV-2B6SEH9 535 aa19.02■□□□□ 0.64
TNFRSF1A-204ENST00000440083 IL17REQ8NFR9 667 aa19.02■□□□□ 0.64
TNFRSF1A-204ENST00000440083 ASAP1Q9ULH1 1129 aa19.02■□□□□ 0.64
TNFRSF1A-204ENST00000440083 PALLDQ8WX93 1383 aa19.02■□□□□ 0.64
TNFRSF1A-204ENST00000440083 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.63
TNFRSF1A-204ENST00000440083 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
TNFRSF1A-204ENST00000440083 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
TNFRSF1A-204ENST00000440083 DCTN1Q14203 1278 aa19■□□□□ 0.63
TNFRSF1A-204ENST00000440083 NFATC2IPQ8NCF5 419 aa19■□□□□ 0.63
TNFRSF1A-204ENST00000440083 LRRC4BQ9NT99 713 aa19■□□□□ 0.63
TNFRSF1A-204ENST00000440083 NEFMP07197 916 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 NFE2L2Q16236 605 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 MCM10Q7L590 875 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-204ENST00000440083 PNNQ9H307 717 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-204ENST00000440083 PAPPAQ13219 1627 aa18.98■□□□□ 0.63
TNFRSF1A-204ENST00000440083 SIPA1L3O60292 1781 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-204ENST00000440083 APAF1O14727 1248 aa18.97■□□□□ 0.63
TNFRSF1A-204ENST00000440083 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-204ENST00000440083 CEMIPQ8WUJ3 1361 aa18.96■□□□□ 0.63
TNFRSF1A-204ENST00000440083 PSDA5PKW4 1024 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-204ENST00000440083 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-204ENST00000440083 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-204ENST00000440083 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-204ENST00000440083 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
TNFRSF1A-204ENST00000440083 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
TNFRSF1A-204ENST00000440083 GOLGA2Q08379 1002 aa18.94■□□□□ 0.62
TNFRSF1A-204ENST00000440083 C5P01031 1676 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 RIPK4P57078 832 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 TEFQ10587 303 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 R3HDM1Q15032 1099 aaKnown RBP18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 ZNF827Q17R98 1081 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 SLC27A3Q5K4L6 730 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 ZNF521Q96K83 1311 aa18.93■□□□□ 0.62
TNFRSF1A-204ENST00000440083 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 PTCD1O75127 700 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 SIK1P57059 783 aa18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1A-204ENST00000440083 TAF1LQ8IZX4 1826 aa18.91■□□□□ 0.62
TNFRSF1A-204ENST00000440083 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-204ENST00000440083 ITPK1Q13572 414 aa18.91■□□□□ 0.62
TNFRSF1A-204ENST00000440083 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-204ENST00000440083 KCNQ3O43525 872 aa18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 IRX6P78412 446 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 LINC00116Q8NCU8 138 aa18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 TUBGCP6Q96RT7 1819 aa18.9■□□□□ 0.62
TNFRSF1A-204ENST00000440083 TJP1Q07157 1748 aa18.89■□□□□ 0.61
TNFRSF1A-204ENST00000440083 UBR2Q8IWV8 1755 aa18.89■□□□□ 0.61
TNFRSF1A-204ENST00000440083 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
TNFRSF1A-204ENST00000440083 ATP6V1AP38606 617 aa18.88■□□□□ 0.61
TNFRSF1A-204ENST00000440083 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
TNFRSF1A-204ENST00000440083 MIS18AQ9NYP9 233 aa18.88■□□□□ 0.61
TNFRSF1A-204ENST00000440083 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
TNFRSF1A-204ENST00000440083 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
TNFRSF1A-204ENST00000440083 BTBD11A6QL63 1104 aa18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 E9PSI1 815 aa18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 SLC15A2Q16348 729 aa18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 PDGFDQ9GZP0 370 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-204ENST00000440083 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
TNFRSF1A-204ENST00000440083 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-204ENST00000440083 ZNF831Q5JPB2 1677 aa18.85■□□□□ 0.61
TNFRSF1A-204ENST00000440083 SLFN5Q08AF3 891 aa18.85■□□□□ 0.61
TNFRSF1A-204ENST00000440083 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
TNFRSF1A-204ENST00000440083 TTC5Q8N0Z6 440 aa18.85■□□□□ 0.61
TNFRSF1A-204ENST00000440083 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 TAF7Q15545 349 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 DUSP27Q5VZP5 1158 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 DNAJC10Q8IXB1 793 aa18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-204ENST00000440083 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.61
TNFRSF1A-204ENST00000440083 RRP1P56182 461 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-204ENST00000440083 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
TNFRSF1A-204ENST00000440083 TFCP2L1Q9NZI6 479 aa18.82■□□□□ 0.6
TNFRSF1A-204ENST00000440083 PNPLA7Q6ZV29 1317 aa18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 AK7Q96M32 723 aa18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 UBR3Q6ZT12 1888 aa18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
TNFRSF1A-204ENST00000440083 QSER1Q2KHR3 1735 aa18.8■□□□□ 0.6
TNFRSF1A-204ENST00000440083 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms