RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
LDLRAD4-204ENST00000435606 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 TOM1O60784 492 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 CCDC96Q2M329 555 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 TNMDQ9H2S6 317 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 RFC4P35249 363 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 NAPBQ9H115 298 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 MSH6P52701 1360 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 EZRP15311 586 aaKnown RBP12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
LDLRAD4-204ENST00000435606 BCAR3O75815 825 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 KIF1BPQ96EK5 621 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 IQCA1Q86XH1 822 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 ZNF397Q8NF99 534 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 JAKMIP3Q5VZ66 844 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 MYD88Q99836 296 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 FEZ1Q99689 392 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 RNF41Q9H4P4 317 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 PPP1R42Q7Z4L9 355 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 SKIDA1Q1XH10 827 aa12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 PHAXQ9H814 394 aaKnown RBP12.47□□□□□ -0.41
LDLRAD4-204ENST00000435606 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 CAVIN1Q6NZI2 390 aaKnown RBP12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 LDHCP07864 332 aa12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 TMEM266Q2M3C6 531 aa12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 TSG101Q99816 390 aa12.46□□□□□ -0.41
LDLRAD4-204ENST00000435606 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.42
LDLRAD4-204ENST00000435606 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.42
LDLRAD4-204ENST00000435606 BAG3O95817 575 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 SSR1P43307 286 aaKnown RBP12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 HLA-DOAP06340 250 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 CABP5Q9NP86 173 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 FOXO3O43524 673 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
LDLRAD4-204ENST00000435606 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 CWC15Q9P013 229 aaKnown RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 FGFR1OPO95684 399 aaKnown RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 ARHGEF11O15085 1522 aa12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 MRE11P49959 708 aa12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 WAPLQ7Z5K2 1190 aa12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 RNF214Q8ND24 703 aa12.44□□□□□ -0.42
LDLRAD4-204ENST00000435606 TIAM1Q13009 1591 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 ANAPC15P60006 121 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 KIF20AO95235 890 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 H0YHG0 523 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 GSTO1P78417 241 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 DENND4BO75064 1496 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 TTC21BQ7Z4L5 1316 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 AXDND1Q5T1B0 1012 aaPredicted RBP12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
LDLRAD4-204ENST00000435606 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 TAF4BQ92750 862 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 HDAC9Q9UKV0 1011 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 IL1RAPL2Q9NP60 686 aa12.42□□□□□ -0.42
LDLRAD4-204ENST00000435606 K7ELQ4 463 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 VPS36Q86VN1 386 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 363.7 ms