RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 DLC1Q96QB1 1528 aa14.43□□□□□ -0.1
ERCC1-204ENST00000423698 MPNDQ8N594 471 aa14.43□□□□□ -0.1
ERCC1-204ENST00000423698 CHMP4BQ9H444 224 aaKnown RBP14.43□□□□□ -0.1
ERCC1-204ENST00000423698 DDX49Q9Y6V7 483 aaKnown RBP14.43□□□□□ -0.1
ERCC1-204ENST00000423698 DLG5Q8TDM6 1919 aa14.43□□□□□ -0.1
ERCC1-204ENST00000423698 MSNP26038 577 aaKnown RBP14.42□□□□□ -0.1
ERCC1-204ENST00000423698 PIP4K2AP48426 406 aaPredicted RBP14.42□□□□□ -0.1
ERCC1-204ENST00000423698 NEK4P51957 841 aa14.42□□□□□ -0.1
ERCC1-204ENST00000423698 ADAMTS13Q76LX8 1427 aa14.42□□□□□ -0.1
ERCC1-204ENST00000423698 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
ERCC1-204ENST00000423698 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
ERCC1-204ENST00000423698 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
ERCC1-204ENST00000423698 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
ERCC1-204ENST00000423698 USP26Q9BXU7 913 aa14.41□□□□□ -0.1
ERCC1-204ENST00000423698 USP6P35125 1406 aa14.41□□□□□ -0.1
ERCC1-204ENST00000423698 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
ERCC1-204ENST00000423698 RBM27Q9P2N5 1060 aaKnown RBP14.41□□□□□ -0.1
ERCC1-204ENST00000423698 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
ERCC1-204ENST00000423698 PIK3R4Q99570 1358 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 GNAI2P04899 355 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 HOXC9P31274 260 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 PALD1Q9ULE6 856 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 SETD1AO15047 1707 aaKnown RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 SURF6O75683 361 aaKnown RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 NASPP49321 788 aaPredicted RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 PDE1AP54750 535 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 BRPF1P55201 1214 aaPredicted RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 PSME1Q06323 249 aa14.4□□□□□ -0.1
ERCC1-204ENST00000423698 CAVIN1Q6NZI2 390 aaKnown RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
ERCC1-204ENST00000423698 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
ERCC1-204ENST00000423698 GBP4Q96PP9 640 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 GDPD2Q9HCC8 539 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
ERCC1-204ENST00000423698 CASC1Q6TDU7 716 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 TSC1Q92574 1164 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 IL25Q9H293 177 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 OS9Q13438 667 aaPredicted RBP14.39□□□□□ -0.11
ERCC1-204ENST00000423698 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
ERCC1-204ENST00000423698 ANKRD26Q9UPS8 1709 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 CHPF2Q9P2E5 772 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 RGS12O14924 1447 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 ATP10DQ9P241 1426 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 HMMRO75330 724 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 NBPF7P0C2Y1 421 aaPredicted RBP14.38□□□□□ -0.11
ERCC1-204ENST00000423698 CPA1P15085 419 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
ERCC1-204ENST00000423698 CDC42BPGQ6DT37 1551 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 UQCRHLA0A096LP55 91 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 UQCRHP07919 91 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 TAF7Q15545 349 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-204ENST00000423698 ORAI2Q96SN7 254 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 CEP170BQ9Y4F5 1589 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-204ENST00000423698 UBTFL1P0CB47 393 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-204ENST00000423698 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
ERCC1-204ENST00000423698 SNX21Q969T3 373 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 LRRCC1Q9C099 1032 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 CCDC30Q5VVM6 783 aa14.37□□□□□ -0.11
ERCC1-204ENST00000423698 PI4KAP2A4QPH2 592 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 BAG4O95429 457 aaKnown RBP14.36□□□□□ -0.11
ERCC1-204ENST00000423698 PI4KAP1Q8N8J0 262 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 ANP32BQ92688 251 aaKnown RBP14.36□□□□□ -0.11
ERCC1-204ENST00000423698 FLT4P35916 1363 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 CRB1P82279 1406 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
ERCC1-204ENST00000423698 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-204ENST00000423698 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
ERCC1-204ENST00000423698 PA2G4Q9UQ80 394 aaKnown RBP14.36□□□□□ -0.11
ERCC1-204ENST00000423698 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 MX1P20591 662 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
ERCC1-204ENST00000423698 PLEKHG1Q9ULL1 1385 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 ERC2O15083 957 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 PTPRCP08575 1304 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 SIL1Q9H173 461 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 SPG7Q9UQ90 795 aa14.35□□□□□ -0.11
ERCC1-204ENST00000423698 CCT4P50991 539 aaKnown RBP14.34□□□□□ -0.11
ERCC1-204ENST00000423698 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-204ENST00000423698 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 DDIT3P35638 169 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 TEFQ10587 303 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
ERCC1-204ENST00000423698 CWF19L2Q2TBE0 894 aaKnown RBP14.34□□□□□ -0.11
ERCC1-204ENST00000423698 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
ERCC1-204ENST00000423698 OFD1O75665 1012 aa14.33□□□□□ -0.11
ERCC1-204ENST00000423698 RABEP1Q15276 862 aa14.33□□□□□ -0.11
ERCC1-204ENST00000423698 ST18O60284 1047 aa14.33□□□□□ -0.12
ERCC1-204ENST00000423698 CWC27Q6UX04 472 aaKnown RBP14.33□□□□□ -0.12
ERCC1-204ENST00000423698 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms