RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 BAG4O95429 457 aaKnown RBP16.91■□□□□ 0.3
CTCFL-203ENST00000422109 MRE11P49959 708 aa16.91■□□□□ 0.3
CTCFL-203ENST00000422109 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
CTCFL-203ENST00000422109 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
CTCFL-203ENST00000422109 HOXC9P31274 260 aa16.91■□□□□ 0.3
CTCFL-203ENST00000422109 XPCQ01831 940 aaPredicted RBP16.91■□□□□ 0.3
CTCFL-203ENST00000422109 NEK4P51957 841 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 NUTM1Q86Y26 1132 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 ERC2O15083 957 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
CTCFL-203ENST00000422109 UBR1Q8IWV7 1749 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 ST18O60284 1047 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
CTCFL-203ENST00000422109 TTC21AQ8NDW8 1320 aa16.88■□□□□ 0.29
CTCFL-203ENST00000422109 REC8O95072 547 aa16.88■□□□□ 0.29
CTCFL-203ENST00000422109 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
CTCFL-203ENST00000422109 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
CTCFL-203ENST00000422109 UNC5CLQ8IV45 518 aa16.88■□□□□ 0.29
CTCFL-203ENST00000422109 RGPD8O14715 1765 aaPredicted RBP16.88■□□□□ 0.29
CTCFL-203ENST00000422109 DTNBO60941 627 aa16.87■□□□□ 0.29
CTCFL-203ENST00000422109 MX1P20591 662 aa16.87■□□□□ 0.29
CTCFL-203ENST00000422109 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
CTCFL-203ENST00000422109 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
CTCFL-203ENST00000422109 KCNQ3O43525 872 aa16.86■□□□□ 0.29
CTCFL-203ENST00000422109 PRPF40AO75400 957 aaKnown RBP16.86■□□□□ 0.29
CTCFL-203ENST00000422109 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
CTCFL-203ENST00000422109 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
CTCFL-203ENST00000422109 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
CTCFL-203ENST00000422109 TAF7Q15545 349 aaPredicted RBP16.86■□□□□ 0.29
CTCFL-203ENST00000422109 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
CTCFL-203ENST00000422109 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
CTCFL-203ENST00000422109 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
CTCFL-203ENST00000422109 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
CTCFL-203ENST00000422109 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
CTCFL-203ENST00000422109 GNAI3P08754 354 aa16.85■□□□□ 0.29
CTCFL-203ENST00000422109 TRIM44Q96DX7 344 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-203ENST00000422109 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-203ENST00000422109 NAP1L5Q96NT1 182 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-203ENST00000422109 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-203ENST00000422109 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
CTCFL-203ENST00000422109 ATP8B2P98198 1209 aa16.83■□□□□ 0.29
CTCFL-203ENST00000422109 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.29
CTCFL-203ENST00000422109 SSH2Q76I76 1423 aa16.83■□□□□ 0.29
CTCFL-203ENST00000422109 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
CTCFL-203ENST00000422109 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
CTCFL-203ENST00000422109 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 IL25Q9H293 177 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 KIF13AQ9H1H9 1805 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 NUCB2P80303 420 aa16.82■□□□□ 0.28
CTCFL-203ENST00000422109 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
CTCFL-203ENST00000422109 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
CTCFL-203ENST00000422109 PSME1Q06323 249 aa16.81■□□□□ 0.28
CTCFL-203ENST00000422109 KDRP35968 1356 aa16.81■□□□□ 0.28
CTCFL-203ENST00000422109 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
CTCFL-203ENST00000422109 OS9Q13438 667 aaPredicted RBP16.81■□□□□ 0.28
CTCFL-203ENST00000422109 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
CTCFL-203ENST00000422109 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 CHMLP26374 656 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
CTCFL-203ENST00000422109 DIP2AQ14689 1571 aa16.8■□□□□ 0.28
CTCFL-203ENST00000422109 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
CTCFL-203ENST00000422109 TEFQ10587 303 aa16.79■□□□□ 0.28
CTCFL-203ENST00000422109 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
CTCFL-203ENST00000422109 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
CTCFL-203ENST00000422109 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
CTCFL-203ENST00000422109 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
CTCFL-203ENST00000422109 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
CTCFL-203ENST00000422109 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
CTCFL-203ENST00000422109 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
CTCFL-203ENST00000422109 MCCP23508 829 aa16.77■□□□□ 0.28
CTCFL-203ENST00000422109 ZNF530Q6P9A1 599 aaPredicted RBP16.77■□□□□ 0.28
CTCFL-203ENST00000422109 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
CTCFL-203ENST00000422109 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
CTCFL-203ENST00000422109 PRAMEF22A3QJZ6 481 aa16.77■□□□□ 0.28
CTCFL-203ENST00000422109 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.27
CTCFL-203ENST00000422109 IBTKQ9P2D0 1353 aaPredicted RBP16.76■□□□□ 0.27
CTCFL-203ENST00000422109 BTBD11A6QL63 1104 aa16.76■□□□□ 0.27
CTCFL-203ENST00000422109 ESPNB1AK53 854 aa16.76■□□□□ 0.27
CTCFL-203ENST00000422109 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
CTCFL-203ENST00000422109 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
CTCFL-203ENST00000422109 PIK3C2AO00443 1686 aa16.76■□□□□ 0.27
CTCFL-203ENST00000422109 CWC27Q6UX04 472 aaKnown RBP16.75■□□□□ 0.27
CTCFL-203ENST00000422109 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
CTCFL-203ENST00000422109 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
CTCFL-203ENST00000422109 CPA1P15085 419 aa16.75■□□□□ 0.27
CTCFL-203ENST00000422109 PTMSP20962 102 aa16.75■□□□□ 0.27
CTCFL-203ENST00000422109 RHPN1Q8TCX5 695 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms