RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MAP3K19Q56UN5 1328 aa18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 MCCP23508 829 aa18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 PALD1Q9ULE6 856 aa18.5■□□□□ 0.55
SEMA3B-203ENST00000419007 MX1P20591 662 aa18.49■□□□□ 0.55
SEMA3B-203ENST00000419007 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
SEMA3B-203ENST00000419007 RRP9O43818 475 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-203ENST00000419007 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
SEMA3B-203ENST00000419007 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-203ENST00000419007 AMPHP49418 695 aa18.48■□□□□ 0.55
SEMA3B-203ENST00000419007 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
SEMA3B-203ENST00000419007 FLIIQ13045 1269 aa18.46■□□□□ 0.55
SEMA3B-203ENST00000419007 GDPD2Q9HCC8 539 aa18.46■□□□□ 0.55
SEMA3B-203ENST00000419007 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
SEMA3B-203ENST00000419007 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-203ENST00000419007 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
SEMA3B-203ENST00000419007 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 CRB1P82279 1406 aa18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 TPM2P07951 284 aa18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 LRSAM1Q6UWE0 723 aa18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
SEMA3B-203ENST00000419007 ZBTB7CA1YPR0 619 aa18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 GNAI3P08754 354 aa18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 SLC26A8Q96RN1 970 aa18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 CHMLP26374 656 aa18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-203ENST00000419007 NUTM2GQ5VZR2 741 aa18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 OFD1O75665 1012 aa18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 MCM2P49736 904 aa18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 EYA1Q99502 592 aa18.43■□□□□ 0.54
SEMA3B-203ENST00000419007 PTMAP06454 111 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-203ENST00000419007 CCDC30Q5VVM6 783 aa18.42■□□□□ 0.54
SEMA3B-203ENST00000419007 MBD3O95983 291 aa18.42■□□□□ 0.54
SEMA3B-203ENST00000419007 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
SEMA3B-203ENST00000419007 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 MON2Q7Z3U7 1717 aa18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 BRD1O95696 1058 aa18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 MPNDQ8N594 471 aa18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
SEMA3B-203ENST00000419007 LTKP29376 864 aa18.4■□□□□ 0.54
SEMA3B-203ENST00000419007 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
SEMA3B-203ENST00000419007 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
SEMA3B-203ENST00000419007 C3P01024 1663 aa18.4■□□□□ 0.54
SEMA3B-203ENST00000419007 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
SEMA3B-203ENST00000419007 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 PDLIM2Q96JY6 352 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 OVOS2A0A0J9YW53 1432 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 OVOS2Q6IE36 1432 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 USP6P35125 1406 aa18.39■□□□□ 0.53
SEMA3B-203ENST00000419007 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
SEMA3B-203ENST00000419007 IL25Q9H293 177 aa18.38■□□□□ 0.53
SEMA3B-203ENST00000419007 GADD45BO75293 160 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-203ENST00000419007 EIF2S2P20042 333 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-203ENST00000419007 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
SEMA3B-203ENST00000419007 CUL4AQ13619 759 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 SALL3Q9BXA9 1300 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 NLRP6P59044 892 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 FAM13BQ9NYF5 915 aa18.37■□□□□ 0.53
SEMA3B-203ENST00000419007 DTNBO60941 627 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 ZKSCAN5Q9Y2L8 839 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 ANAPC15P60006 121 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 USP44Q9H0E7 712 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 FLT4P35916 1363 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 THEMISQ8N1K5 641 aaPredicted RBP18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 SRCIN1Q9C0H9 1055 aa18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-203ENST00000419007 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 USP48Q86UV5 1035 aa18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 INTS4Q96HW7 963 aaKnown RBP18.35■□□□□ 0.53
SEMA3B-203ENST00000419007 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
SEMA3B-203ENST00000419007 ARID3AQ99856 593 aa18.34■□□□□ 0.53
SEMA3B-203ENST00000419007 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
SEMA3B-203ENST00000419007 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
SEMA3B-203ENST00000419007 TECPR2O15040 1411 aa18.34■□□□□ 0.53
SEMA3B-203ENST00000419007 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 ZNF500O60304 480 aaPredicted RBP18.33■□□□□ 0.52
SEMA3B-203ENST00000419007 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms