RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 CWC25Q9NXE8 425 aaPredicted RBP13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 EYA1Q99502 592 aa13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 COL17A1Q9UMD9 1497 aaPredicted RBP13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 PTPRCP08575 1304 aa13.6□□□□□ -0.23
SHROOM2-202ENST00000418909 PDE4AP27815 886 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 XBP1P17861 261 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 TPM4P67936 248 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 PREX2Q70Z35 1606 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 STK32BQ9NY57 414 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 ABCF2Q9UG63 623 aa13.59□□□□□ -0.23
SHROOM2-202ENST00000418909 KIF1BPQ96EK5 621 aa13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 CLASP1Q7Z460 1538 aa13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
SHROOM2-202ENST00000418909 WDHD1O75717 1129 aaPredicted RBP13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 CCDC43Q96MW1 224 aaKnown RBP13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 BAG6P46379 1132 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 TMEM57Q8N5G2 664 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 SLC5A1P13866 664 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
SHROOM2-202ENST00000418909 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 MBIPQ9NS73 344 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 ATP2B2Q01814 1243 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
SHROOM2-202ENST00000418909 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 F6X3S4 739 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 TPTE2Q6XPS3 522 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 DRC7Q8IY82 874 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 PDZRN3Q9UPQ7 1066 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 IL1RAPL2Q9NP60 686 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
SHROOM2-202ENST00000418909 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 ADGBQ8N7X0 1667 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 CCDC47Q96A33 483 aaKnown RBP13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 ZNF287Q9HBT7 754 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 SMC3Q9UQE7 1217 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
SHROOM2-202ENST00000418909 TDO2P48775 406 aa13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 NIP7Q9Y221 180 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 DZIP1Q86YF9 867 aaKnown RBP13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 DZIP3Q86Y13 1208 aaKnown RBP13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 METP08581 1390 aa13.53□□□□□ -0.24
SHROOM2-202ENST00000418909 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.24
SHROOM2-202ENST00000418909 GLRX3O76003 335 aaKnown RBP13.52□□□□□ -0.24
SHROOM2-202ENST00000418909 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.24
SHROOM2-202ENST00000418909 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.24
SHROOM2-202ENST00000418909 AIDAQ96BJ3 306 aa13.52□□□□□ -0.24
SHROOM2-202ENST00000418909 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
SHROOM2-202ENST00000418909 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
SHROOM2-202ENST00000418909 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 ANXA1P04083 346 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 LDHCP07864 332 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 GNPATO15228 680 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 A0A0U1RQG5 324 aaPredicted RBP13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
SHROOM2-202ENST00000418909 L1TD1Q5T7N2 865 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms