RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 EVI5O60447 810 aa9.63□□□□□ -0.87
CXCR4-202ENST00000409817 POTEIP0CG38 1075 aa9.63□□□□□ -0.87
CXCR4-202ENST00000409817 MAP2K5Q13163 448 aa9.63□□□□□ -0.87
CXCR4-202ENST00000409817 PTCD2Q8WV60 388 aaKnown RBP9.63□□□□□ -0.87
CXCR4-202ENST00000409817 SLC39A7Q92504 469 aa9.63□□□□□ -0.87
CXCR4-202ENST00000409817 IRF6O14896 467 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 RRS1Q15050 365 aaKnown RBP9.62□□□□□ -0.87
CXCR4-202ENST00000409817 KDM2BQ8NHM5 1336 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 RGPD8O14715 1765 aaPredicted RBP9.62□□□□□ -0.87
CXCR4-202ENST00000409817 NWD1Q149M9 1564 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 FLT4P35916 1363 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 GNPATO15228 680 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 FBLN1P23142 703 aa9.62□□□□□ -0.87
CXCR4-202ENST00000409817 GNAI1P63096 354 aa9.61□□□□□ -0.87
CXCR4-202ENST00000409817 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
CXCR4-202ENST00000409817 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
CXCR4-202ENST00000409817 IFT57Q9NWB7 429 aa9.61□□□□□ -0.87
CXCR4-202ENST00000409817 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
CXCR4-202ENST00000409817 RGPD1P0DJD0 1748 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 ARHGEF10O15013 1369 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 PIK3C2AO00443 1686 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 HMOX1P09601 288 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 C7P10643 843 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 EIF4A2Q14240 407 aaKnown RBP9.6□□□□□ -0.87
CXCR4-202ENST00000409817 HIC1Q14526 733 aa9.6□□□□□ -0.87
CXCR4-202ENST00000409817 TBC1D12O60347 775 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 EXOSC9Q06265 439 aaKnown RBP9.59□□□□□ -0.87
CXCR4-202ENST00000409817 ZKSCAN2Q63HK3 967 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 CLUAP1Q96AJ1 413 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
CXCR4-202ENST00000409817 KIF16BQ96L93 1317 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
CXCR4-202ENST00000409817 PTGDRQ13258 359 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 AMHR2Q16671 573 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 PHACTR3Q96KR7 559 aa9.59□□□□□ -0.87
CXCR4-202ENST00000409817 SLC34A2O95436 690 aa9.58□□□□□ -0.88
CXCR4-202ENST00000409817 ZNF853P0CG23 659 aa9.58□□□□□ -0.88
CXCR4-202ENST00000409817 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-202ENST00000409817 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
CXCR4-202ENST00000409817 MAP3K19Q56UN5 1328 aa9.58□□□□□ -0.88
CXCR4-202ENST00000409817 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
CXCR4-202ENST00000409817 KDRP35968 1356 aa9.58□□□□□ -0.88
CXCR4-202ENST00000409817 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
CXCR4-202ENST00000409817 SMC4Q9NTJ3 1288 aa9.57□□□□□ -0.88
CXCR4-202ENST00000409817 SULT6B1Q6IMI4 303 aa9.57□□□□□ -0.88
CXCR4-202ENST00000409817 DLG5Q8TDM6 1919 aa9.57□□□□□ -0.88
CXCR4-202ENST00000409817 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 AMPHP49418 695 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 MVPQ14764 893 aaKnown RBP9.56□□□□□ -0.88
CXCR4-202ENST00000409817 HSP90AB2PQ58FF8 381 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
CXCR4-202ENST00000409817 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
CXCR4-202ENST00000409817 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 SSH1Q8WYL5 1049 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
CXCR4-202ENST00000409817 MARF1Q9Y4F3 1742 aaKnown RBP9.55□□□□□ -0.88
CXCR4-202ENST00000409817 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 ABTB2Q8N961 1025 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 ARHGAP45Q92619 1136 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 CHMP4BQ9H444 224 aaKnown RBP9.55□□□□□ -0.88
CXCR4-202ENST00000409817 IGSF1Q8N6C5 1336 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 KCNH5Q8NCM2 988 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
CXCR4-202ENST00000409817 DDX19BQ9UMR2 479 aa9.55□□□□□ -0.88
CXCR4-202ENST00000409817 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
CXCR4-202ENST00000409817 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
CXCR4-202ENST00000409817 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
CXCR4-202ENST00000409817 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
CXCR4-202ENST00000409817 KIF1AQ12756 1690 aa9.54□□□□□ -0.88
CXCR4-202ENST00000409817 PHRF1Q9P1Y6 1649 aaKnown RBP9.53□□□□□ -0.88
CXCR4-202ENST00000409817 DCCP43146 1447 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 RLBP1P12271 317 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 TRIM27P14373 513 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 PSME1Q06323 249 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 KIAA0232Q92628 1395 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 VAMP4O75379 141 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 HOXC9P31274 260 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 ESCO1Q5FWF5 840 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 AEBP1Q8IUX7 1158 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
CXCR4-202ENST00000409817 C19orf44Q9H6X5 657 aa9.53□□□□□ -0.88
CXCR4-202ENST00000409817 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
CXCR4-202ENST00000409817 MST1RQ04912 1400 aa9.52□□□□□ -0.89
CXCR4-202ENST00000409817 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
CXCR4-202ENST00000409817 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
CXCR4-202ENST00000409817 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
CXCR4-202ENST00000409817 LAS1LQ9Y4W2 734 aaKnown RBP9.52□□□□□ -0.89
CXCR4-202ENST00000409817 NFAT5O94916 1531 aa9.52□□□□□ -0.89
CXCR4-202ENST00000409817 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
CXCR4-202ENST00000409817 CHL1O00533 1208 aa9.51□□□□□ -0.89
CXCR4-202ENST00000409817 TWISTNBQ3B726 338 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-202ENST00000409817 PROSER2Q86WR7 435 aaPredicted RBP9.51□□□□□ -0.89
CXCR4-202ENST00000409817 RTF1Q92541 710 aaKnown RBP9.51□□□□□ -0.89
CXCR4-202ENST00000409817 EYA1Q99502 592 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms