RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 RGS12O14924 1447 aa26.73■■□□□ 1.87
CUEDC1-202ENST00000407144 ZC3H13Q5T200 1668 aaKnown RBP26.72■■□□□ 1.87
CUEDC1-202ENST00000407144 COL3A1P02461 1466 aaPredicted RBP26.72■■□□□ 1.87
CUEDC1-202ENST00000407144 KDM4FA0A1W2PPD8 638 aa26.72■■□□□ 1.87
CUEDC1-202ENST00000407144 NAA30Q147X3 362 aaPredicted RBP26.72■■□□□ 1.87
CUEDC1-202ENST00000407144 KNDC1Q76NI1 1749 aa26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 RBM6P78332 1123 aaKnown RBP26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 RNF20Q5VTR2 975 aa26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 C16orf71Q8IYS4 520 aaPredicted RBP26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 IFT57Q9NWB7 429 aa26.71■■□□□ 1.87
CUEDC1-202ENST00000407144 MCCP23508 829 aa26.7■■□□□ 1.87
CUEDC1-202ENST00000407144 HNRNPH2P55795 449 aaKnown RBP26.7■■□□□ 1.86
CUEDC1-202ENST00000407144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.7■■□□□ 1.86
CUEDC1-202ENST00000407144 NOL10Q9BSC4 688 aaKnown RBP26.7■■□□□ 1.86
CUEDC1-202ENST00000407144 VAMP4O75379 141 aa26.69■■□□□ 1.86
CUEDC1-202ENST00000407144 CCDC192P0DO97 292 aa26.69■■□□□ 1.86
CUEDC1-202ENST00000407144 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
CUEDC1-202ENST00000407144 TCHHQ07283 1943 aa26.69■■□□□ 1.86
CUEDC1-202ENST00000407144 ERO1AQ96HE7 468 aa26.68■■□□□ 1.86
CUEDC1-202ENST00000407144 API5Q9BZZ5 524 aaKnown RBP26.68■■□□□ 1.86
CUEDC1-202ENST00000407144 FAM200AQ8TCP9 573 aa26.68■■□□□ 1.86
CUEDC1-202ENST00000407144 PUS7Q96PZ0 661 aaKnown RBP26.68■■□□□ 1.86
CUEDC1-202ENST00000407144 GIMAP6Q6P9H5 292 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 CNPY2Q9Y2B0 182 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 AGLP35573 1532 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 BMS1Q14692 1282 aaKnown RBP26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 CEP135Q66GS9 1140 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 CCDC186Q7Z3E2 898 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 ANKRD44Q8N8A2 993 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 CHMP4AQ9BY43 222 aa26.67■■□□□ 1.86
CUEDC1-202ENST00000407144 U2SURPO15042 1029 aaKnown RBP26.66■■□□□ 1.86
CUEDC1-202ENST00000407144 MAPK8IP2Q13387 824 aaPredicted RBP26.66■■□□□ 1.86
CUEDC1-202ENST00000407144 ATP6V1DQ9Y5K8 247 aa26.66■■□□□ 1.86
CUEDC1-202ENST00000407144 NRXN1Q9ULB1 1477 aa26.66■■□□□ 1.86
CUEDC1-202ENST00000407144 ZSCAN25Q6NSZ9 544 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 ZFP91Q96JP5 570 aaPredicted RBP26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 CCDC171Q6TFL3 1326 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 ADAMTSL3P82987 1691 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 RAD51AP2Q09MP3 1159 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 FBXO38Q6PIJ6 1188 aa26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 RPAP2Q8IXW5 612 aaPredicted RBP26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.65■■□□□ 1.86
CUEDC1-202ENST00000407144 ZSCAN22P10073 491 aaPredicted RBP26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 TPD52L1Q16890 204 aaPredicted RBP26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 FOXD4L6Q3SYB3 417 aaPredicted RBP26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 MUM1L1Q5H9M0 696 aa26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 FOXD4L3Q6VB84 417 aaPredicted RBP26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 OTUD7AQ8TE49 926 aaPredicted RBP26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.86
CUEDC1-202ENST00000407144 SSH2Q76I76 1423 aa26.63■■□□□ 1.85
CUEDC1-202ENST00000407144 GEMIN8Q9NWZ8 242 aaKnown RBP26.63■■□□□ 1.85
CUEDC1-202ENST00000407144 IFT172Q9UG01 1749 aa26.63■■□□□ 1.85
CUEDC1-202ENST00000407144 QRICH2Q9H0J4 1663 aa26.62■■□□□ 1.85
CUEDC1-202ENST00000407144 ZNF215Q9UL58 517 aaPredicted RBP26.62■■□□□ 1.85
CUEDC1-202ENST00000407144 LRMPQ12912 555 aa26.61■■□□□ 1.85
CUEDC1-202ENST00000407144 ATP10DQ9P241 1426 aa26.61■■□□□ 1.85
CUEDC1-202ENST00000407144 KIF3BO15066 747 aa26.61■■□□□ 1.85
CUEDC1-202ENST00000407144 TET3O43151 1660 aa26.61■■□□□ 1.85
CUEDC1-202ENST00000407144 ADGRF5Q8IZF2 1346 aa26.6■■□□□ 1.85
CUEDC1-202ENST00000407144 PLA2G4DQ86XP0 818 aa26.6■■□□□ 1.85
CUEDC1-202ENST00000407144 EPB41L2O43491 1005 aaKnown RBP26.6■■□□□ 1.85
CUEDC1-202ENST00000407144 CTR9Q6PD62 1173 aa26.6■■□□□ 1.85
CUEDC1-202ENST00000407144 FER1L4A9Z1Z3 1794 aa26.6■■□□□ 1.85
CUEDC1-202ENST00000407144 GGT6Q6P531 493 aa26.59■■□□□ 1.85
CUEDC1-202ENST00000407144 ESYT1Q9BSJ8 1104 aa26.59■■□□□ 1.85
CUEDC1-202ENST00000407144 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
CUEDC1-202ENST00000407144 NYAP1Q6ZVC0 841 aa26.58■■□□□ 1.85
CUEDC1-202ENST00000407144 ZNF446Q9NWS9 450 aa26.58■■□□□ 1.85
CUEDC1-202ENST00000407144 NEMFO60524 1076 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 H2AFXP16104 143 aaPredicted RBP26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 ZNF75DP51815 510 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 TXLNBQ8N3L3 684 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 RIMS1Q86UR5 1692 aaKnown RBP26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 CDC25BP30305 580 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 RASSF4Q9H2L5 321 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 ST7Q9NRC1 585 aa26.57■■□□□ 1.84
CUEDC1-202ENST00000407144 SLU7O95391 586 aaKnown RBP26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 F13A1P00488 732 aa26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 TNNT3P45378 269 aaPredicted RBP26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 PALD1Q9ULE6 856 aa26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 ELF2Q15723 593 aa26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 TEX35Q5T0J7 233 aa26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 DRC7Q8IY82 874 aa26.56■■□□□ 1.84
CUEDC1-202ENST00000407144 STX6O43752 255 aa26.55■■□□□ 1.84
CUEDC1-202ENST00000407144 MMP14P50281 582 aa26.55■■□□□ 1.84
CUEDC1-202ENST00000407144 MRVI1Q9Y6F6 885 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 MROH1Q8NDA8 1641 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 NOP2P46087 812 aaKnown RBP26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 PTPN14Q15678 1187 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 CEP85Q6P2H3 762 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 KCND1Q9NSA2 647 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 CDC42BPGQ6DT37 1551 aa26.54■■□□□ 1.84
CUEDC1-202ENST00000407144 KIF2AO00139 706 aaPredicted RBP26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 CACTINQ8WUQ7 758 aaKnown RBP26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 FHOD1Q9Y613 1164 aa26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 FCHSD2O94868 740 aa26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 CERS3Q8IU89 383 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms