RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LARP6Q9BRS8 491 aaKnown RBP9.07□□□□□ -0.96
RTN4-205ENST00000394609 MAP3K19Q56UN5 1328 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 ZNF335Q9H4Z2 1342 aaPredicted RBP9.07□□□□□ -0.96
RTN4-205ENST00000394609 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
RTN4-205ENST00000394609 MAPK8IP3Q9UPT6 1336 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 USP31Q70CQ4 1352 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 FCHSD2O94868 740 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 MAP3K9P80192 1104 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 EIF4A2Q14240 407 aaKnown RBP9.06□□□□□ -0.96
RTN4-205ENST00000394609 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 NGEFQ8N5V2 710 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 DDX17Q92841 729 aaKnown RBP9.06□□□□□ -0.96
RTN4-205ENST00000394609 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 RSPH6AQ9H0K4 717 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 NRKQ7Z2Y5 1582 aa9.06□□□□□ -0.96
RTN4-205ENST00000394609 TMPOP42166 694 aaKnown RBP9.05□□□□□ -0.96
RTN4-205ENST00000394609 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
RTN4-205ENST00000394609 CDK12Q9NYV4 1490 aaPredicted RBP9.05□□□□□ -0.96
RTN4-205ENST00000394609 E9PSI1 815 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 AMPHP49418 695 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
RTN4-205ENST00000394609 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
RTN4-205ENST00000394609 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 RIPK4P57078 832 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 KRT28Q7Z3Y7 464 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 CADPS2Q86UW7 1296 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 AEBP1Q8IUX7 1158 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 RNF123Q5XPI4 1314 aa9.04□□□□□ -0.96
RTN4-205ENST00000394609 IQSEC2Q5JU85 1478 aa9.03□□□□□ -0.96
RTN4-205ENST00000394609 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
RTN4-205ENST00000394609 NEFMP07197 916 aa9.03□□□□□ -0.96
RTN4-205ENST00000394609 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
RTN4-205ENST00000394609 SULT6B1Q6IMI4 303 aa9.03□□□□□ -0.96
RTN4-205ENST00000394609 MAP2P11137 1827 aaKnown RBP9.03□□□□□ -0.96
RTN4-205ENST00000394609 PLIN1O60240 522 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 ERICH6Q7L0X2 663 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 WDR63Q8IWG1 891 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 NBPF3Q9H094 633 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 MSH6P52701 1360 aa9.02□□□□□ -0.96
RTN4-205ENST00000394609 STRCP1A6NGW2 1772 aa9.02□□□□□ -0.97
RTN4-205ENST00000394609 SBNO1A3KN83 1393 aa9.02□□□□□ -0.97
RTN4-205ENST00000394609 PIK3C2AO00443 1686 aa9.02□□□□□ -0.97
RTN4-205ENST00000394609 RRP1P56182 461 aaKnown RBP9.02□□□□□ -0.97
RTN4-205ENST00000394609 MST1RQ04912 1400 aa9.02□□□□□ -0.97
RTN4-205ENST00000394609 STRCQ7RTU9 1775 aa9.02□□□□□ -0.97
RTN4-205ENST00000394609 LTV1Q96GA3 475 aaPredicted RBP9.02□□□□□ -0.97
RTN4-205ENST00000394609 NCOA3Q9Y6Q9 1424 aa9.01□□□□□ -0.97
RTN4-205ENST00000394609 FLT4P35916 1363 aa9.01□□□□□ -0.97
RTN4-205ENST00000394609 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
RTN4-205ENST00000394609 HOXC9P31274 260 aa9.01□□□□□ -0.97
RTN4-205ENST00000394609 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
RTN4-205ENST00000394609 NFE2L2Q16236 605 aa9□□□□□ -0.97
RTN4-205ENST00000394609 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
RTN4-205ENST00000394609 GCP02774 474 aa9□□□□□ -0.97
RTN4-205ENST00000394609 TSR2Q969E8 191 aaKnown RBP9□□□□□ -0.97
RTN4-205ENST00000394609 EYA1Q99502 592 aa9□□□□□ -0.97
RTN4-205ENST00000394609 ADAM33Q9BZ11 813 aa9□□□□□ -0.97
RTN4-205ENST00000394609 LRRC7Q96NW7 1537 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 DCCP43146 1447 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 PEAK1Q9H792 1746 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 BRINP3Q76B58 766 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 KCNH5Q8NCM2 988 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 MYH16Q9H6N6 1097 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 PPP4R2Q9NY27 417 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 SLAIN2Q9P270 581 aa8.99□□□□□ -0.97
RTN4-205ENST00000394609 BCAR3O75815 825 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 PTPN5P54829 565 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 LAS1LQ9Y4W2 734 aaKnown RBP8.98□□□□□ -0.97
RTN4-205ENST00000394609 NPHP3Q7Z494 1330 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 FAM83GA6ND36 823 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 PPP1R3GB7ZBB8 358 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 DCTN1Q14203 1278 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 BBXQ8WY36 941 aaPredicted RBP8.98□□□□□ -0.97
RTN4-205ENST00000394609 IP6K1Q92551 441 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 WNT2BQ93097 391 aa8.98□□□□□ -0.97
RTN4-205ENST00000394609 RGS20O76081 388 aa8.97□□□□□ -0.97
RTN4-205ENST00000394609 ZC3H6P61129 1189 aaKnown RBP8.97□□□□□ -0.97
RTN4-205ENST00000394609 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
RTN4-205ENST00000394609 USHBP1Q8N6Y0 703 aa8.97□□□□□ -0.97
RTN4-205ENST00000394609 EXOC6Q8TAG9 804 aa8.97□□□□□ -0.97
RTN4-205ENST00000394609 PHF14O94880 888 aa8.96□□□□□ -0.97
RTN4-205ENST00000394609 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.97
RTN4-205ENST00000394609 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.97
RTN4-205ENST00000394609 IGSF1Q8N6C5 1336 aa8.96□□□□□ -0.98
RTN4-205ENST00000394609 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
RTN4-205ENST00000394609 BCL2L13Q9BXK5 485 aa8.96□□□□□ -0.98
RTN4-205ENST00000394609 EMILIN3Q9NT22 766 aa8.96□□□□□ -0.98
RTN4-205ENST00000394609 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 KIF24Q5T7B8 1368 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 USP19O94966 1318 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 IL16Q14005 1332 aa8.95□□□□□ -0.98
RTN4-205ENST00000394609 MTHFSDQ2M296 383 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms