RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 IQSEC2Q5JU85 1478 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 NPHP1O15259 732 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 HTATSF1O43719 755 aaKnown RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 RTF1Q92541 710 aaKnown RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 TRIM5Q9C035 493 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 KIDINS220Q9ULH0 1771 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 NOL10Q9BSC4 688 aaKnown RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 UPF3BQ9BZI7 483 aaKnown RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 V9GYY5 206 aaPredicted RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 OTUD7AQ8TE49 926 aaPredicted RBP8.7□□□□□ -1.02
TRIM6-202ENST00000380097 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 DCTPP1Q9H773 170 aa8.7□□□□□ -1.02
TRIM6-202ENST00000380097 UNC13BO14795 1591 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 DIP2BQ9P265 1576 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 NCKAP5LQ9HCH0 1330 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 SLC20A2Q08357 652 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 TEX35Q5T0J7 233 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 CEP135Q66GS9 1140 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 ZBTB9Q96C00 473 aa8.69□□□□□ -1.02
TRIM6-202ENST00000380097 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 RGS22Q8NE09 1264 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
TRIM6-202ENST00000380097 CNPY4Q8N129 248 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 RILPL2Q969X0 211 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 HECW2Q9P2P5 1572 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 LRMPQ12912 555 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 CUL4AQ13619 759 aa8.68□□□□□ -1.02
TRIM6-202ENST00000380097 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
TRIM6-202ENST00000380097 KDM5AP29375 1690 aaKnown RBP8.67□□□□□ -1.02
TRIM6-202ENST00000380097 ERVK-7P63135 1459 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
TRIM6-202ENST00000380097 BMS1Q14692 1282 aaKnown RBP8.67□□□□□ -1.02
TRIM6-202ENST00000380097 PTPN14Q15678 1187 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 CREBRFQ8IUR6 639 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 FAM200AQ8TCP9 573 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 SMC3Q9UQE7 1217 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 EID1Q9Y6B2 187 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 PATL2C9JE40 543 aaKnown RBP8.67□□□□□ -1.02
TRIM6-202ENST00000380097 ABCA6Q8N139 1617 aa8.67□□□□□ -1.02
TRIM6-202ENST00000380097 HMMRO75330 724 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 VAMP4O75379 141 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 ZSCAN22P10073 491 aaPredicted RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 HSPA2P54652 639 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 FAM193AP78312 1265 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 TWISTNBQ3B726 338 aaPredicted RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 KMT5BQ4FZB7 885 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 CABP1Q9NZU7 370 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 ZNF215Q9UL58 517 aaPredicted RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 HNRNPH2P55795 449 aaKnown RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 PLEKHF1Q96S99 279 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 ATAD2Q6PL18 1390 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
TRIM6-202ENST00000380097 STX6O43752 255 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 LTKP29376 864 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 ELF2Q15723 593 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 CAMK4Q16566 473 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 LUZP1Q86V48 1076 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 CLIP2Q9UDT6 1046 aa8.66□□□□□ -1.02
TRIM6-202ENST00000380097 VWDEQ8N2E2 1590 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 AP5Z1O43299 807 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 HMOX1P09601 288 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 CAPN2P17655 700 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 GNAI1P63096 354 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 GPS2Q13227 327 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 NUTM2GQ5VZR2 741 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 GTF3C6Q969F1 213 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
TRIM6-202ENST00000380097 PTPRTO14522 1441 aa8.65□□□□□ -1.02
TRIM6-202ENST00000380097 INO80Q9ULG1 1556 aaPredicted RBP8.65□□□□□ -1.02
TRIM6-202ENST00000380097 RNF17Q9BXT8 1623 aaKnown RBP8.65□□□□□ -1.02
TRIM6-202ENST00000380097 ANAPC15P60006 121 aa8.65□□□□□ -1.03
TRIM6-202ENST00000380097 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.03
TRIM6-202ENST00000380097 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.03
TRIM6-202ENST00000380097 ERO1AQ96HE7 468 aa8.65□□□□□ -1.03
TRIM6-202ENST00000380097 NUP62CLQ9H1M0 184 aa8.65□□□□□ -1.03
TRIM6-202ENST00000380097 VPS37CA5D8V6 355 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 GOLGA6L19H0YKK7 550 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 FBXO38Q6PIJ6 1188 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 ST7Q9NRC1 585 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 NRBP1Q9UHY1 535 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 FRMPD1Q5SYB0 1578 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 PPRC1Q5VV67 1664 aaKnown RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 CEP152O94986 1710 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 POLR3GO15318 223 aaPredicted RBP8.64□□□□□ -1.03
TRIM6-202ENST00000380097 PRKAR2BP31323 418 aa8.64□□□□□ -1.03
TRIM6-202ENST00000380097 ESYT1Q9BSJ8 1104 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms