RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
DDX58-201ENST00000379868 KCNQ4P56696 695 aa7.09□□□□□ -1.27
DDX58-201ENST00000379868 GORABQ5T7V8 394 aa7.09□□□□□ -1.27
DDX58-201ENST00000379868 ZKSCAN2Q63HK3 967 aa7.09□□□□□ -1.27
DDX58-201ENST00000379868 ZBTB3Q9H5J0 574 aa7.09□□□□□ -1.27
DDX58-201ENST00000379868 FANCIQ9NVI1 1328 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 HMGB2P26583 209 aaKnown RBP7.08□□□□□ -1.28
DDX58-201ENST00000379868 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 HDAC5Q9UQL6 1122 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 RNMTO43148 476 aaKnown RBP7.08□□□□□ -1.28
DDX58-201ENST00000379868 GPTP24298 496 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 GNPATO15228 680 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 SNRPA1P09661 255 aaKnown RBP7.08□□□□□ -1.28
DDX58-201ENST00000379868 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
DDX58-201ENST00000379868 PEAK1Q9H792 1746 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 PNPLA6Q8IY17 1366 aa7.08□□□□□ -1.28
DDX58-201ENST00000379868 WDR63Q8IWG1 891 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
DDX58-201ENST00000379868 API5Q9BZZ5 524 aaKnown RBP7.07□□□□□ -1.28
DDX58-201ENST00000379868 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 COG6Q9Y2V7 657 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.07□□□□□ -1.28
DDX58-201ENST00000379868 LMO7Q8WWI1 1683 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 B4GALNT3Q6L9W6 998 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 TBC1D2BQ9UPU7 963 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
DDX58-201ENST00000379868 MAP3K5Q99683 1374 aa7.07□□□□□ -1.28
DDX58-201ENST00000379868 PHKG2P15735 406 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 ZNF652Q9Y2D9 606 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 VPS72Q15906 364 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 KRT24Q2M2I5 525 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 CFAP44Q96MT7 982 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 TEX13AQ9BXU3 409 aaPredicted RBP7.06□□□□□ -1.28
DDX58-201ENST00000379868 MAP2P11137 1827 aaKnown RBP7.06□□□□□ -1.28
DDX58-201ENST00000379868 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 KCNJ4P48050 445 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 RGS3P49796 1198 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 MBIPQ9NS73 344 aa7.06□□□□□ -1.28
DDX58-201ENST00000379868 ZNF219Q9P2Y4 722 aaPredicted RBP7.06□□□□□ -1.28
DDX58-201ENST00000379868 THRAP3Q9Y2W1 955 aaKnown RBP7.06□□□□□ -1.28
DDX58-201ENST00000379868 KIF16BQ96L93 1317 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 ZNF790Q6PG37 636 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 ASAP1Q9ULH1 1129 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 MED1Q15648 1581 aaPredicted RBP7.05□□□□□ -1.28
DDX58-201ENST00000379868 DNAJC10Q8IXB1 793 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
DDX58-201ENST00000379868 FBXW7Q969H0 707 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 DBF4Q9UBU7 674 aaPredicted RBP7.05□□□□□ -1.28
DDX58-201ENST00000379868 CPSF1Q10570 1443 aaKnown RBP7.05□□□□□ -1.28
DDX58-201ENST00000379868 SLC52A2Q9HAB3 445 aa7.05□□□□□ -1.28
DDX58-201ENST00000379868 ATP5J2-PTCD1G3V325 749 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 KCNQ2O43526 872 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 HMMRO75330 724 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 BCAR3O75815 825 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 ZNF496Q96IT1 587 aaPredicted RBP7.04□□□□□ -1.28
DDX58-201ENST00000379868 IGSF1Q8N6C5 1336 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 PIK3C2AO00443 1686 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 UBTFL1P0CB47 393 aaPredicted RBP7.04□□□□□ -1.28
DDX58-201ENST00000379868 RTL1A6NKG5 1358 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 FAM208AQ9UK61 1670 aaKnown RBP7.04□□□□□ -1.28
DDX58-201ENST00000379868 PANK1Q8TE04 598 aa7.04□□□□□ -1.28
DDX58-201ENST00000379868 F6X3S4 739 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 CYP27B1O15528 508 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 A1BGP04217 495 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 POLD1P28340 1107 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 EN1Q05925 392 aaPredicted RBP7.03□□□□□ -1.28
DDX58-201ENST00000379868 TRAPPC3LQ5T215 181 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 MYD88Q99836 296 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 TRMT112Q9UI30 125 aaKnown RBP7.03□□□□□ -1.28
DDX58-201ENST00000379868 SPATA31A1Q5TZJ5 1347 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 LOC102724428A0A0B4J2F2 783 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 HTATSF1O43719 755 aaKnown RBP7.03□□□□□ -1.28
DDX58-201ENST00000379868 SIK1P57059 783 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 COPS6Q7L5N1 327 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 IL17REQ8NFR9 667 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 CHPF2Q9P2E5 772 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 NOB1Q9ULX3 412 aaKnown RBP7.03□□□□□ -1.28
DDX58-201ENST00000379868 USP31Q70CQ4 1352 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 ERVV-2B6SEH9 535 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 CRB1P82279 1406 aa7.03□□□□□ -1.28
DDX58-201ENST00000379868 KCNQ3O43525 872 aa7.02□□□□□ -1.28
DDX58-201ENST00000379868 NBPF5PQ86XG9 351 aaPredicted RBP7.02□□□□□ -1.28
DDX58-201ENST00000379868 DZIP3Q86Y13 1208 aaKnown RBP7.02□□□□□ -1.28
DDX58-201ENST00000379868 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.28
DDX58-201ENST00000379868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.02□□□□□ -1.28
DDX58-201ENST00000379868 USP19O94966 1318 aa7.02□□□□□ -1.28
DDX58-201ENST00000379868 CHD2O14647 1828 aaKnown RBP7.02□□□□□ -1.29
DDX58-201ENST00000379868 HSP90B1P14625 803 aaKnown RBP7.02□□□□□ -1.29
DDX58-201ENST00000379868 SLFN5Q08AF3 891 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 SPATA31A5Q5VU36 1347 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 DEFB132Q7Z7B7 95 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 SPATA31A7Q8IWB4 1347 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 C8orf58Q8NAV2 365 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 JARID2Q92833 1246 aaPredicted RBP7.02□□□□□ -1.29
DDX58-201ENST00000379868 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 ZNF622Q969S3 477 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms