RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 GGNBP2Q9H3C7 697 aa16.49■□□□□ 0.23
KIF3A-201ENST00000378735 TMEM51Q9NW97 253 aa16.49■□□□□ 0.23
KIF3A-201ENST00000378735 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
KIF3A-201ENST00000378735 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
KIF3A-201ENST00000378735 TCHHQ07283 1943 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 KIF20BQ96Q89 1820 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 PDE4CQ08493 712 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 KCNF1Q9H3M0 494 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
KIF3A-201ENST00000378735 PRKAR2BP31323 418 aa16.47■□□□□ 0.23
KIF3A-201ENST00000378735 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
KIF3A-201ENST00000378735 MBIPQ9NS73 344 aa16.47■□□□□ 0.23
KIF3A-201ENST00000378735 CGNQ9P2M7 1197 aaKnown RBP16.47■□□□□ 0.23
KIF3A-201ENST00000378735 CTNNA3Q9UI47 895 aa16.47■□□□□ 0.23
KIF3A-201ENST00000378735 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
KIF3A-201ENST00000378735 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
KIF3A-201ENST00000378735 FAM193AP78312 1265 aa16.46■□□□□ 0.23
KIF3A-201ENST00000378735 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.23
KIF3A-201ENST00000378735 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
KIF3A-201ENST00000378735 NCBP1Q09161 790 aaKnown RBP16.46■□□□□ 0.23
KIF3A-201ENST00000378735 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
KIF3A-201ENST00000378735 CABP2Q9NPB3 220 aa16.46■□□□□ 0.22
KIF3A-201ENST00000378735 PYCARDQ9ULZ3 195 aa16.46■□□□□ 0.22
KIF3A-201ENST00000378735 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
KIF3A-201ENST00000378735 SMTNL1A8MU46 457 aa16.45■□□□□ 0.22
KIF3A-201ENST00000378735 MPNDQ8N594 471 aa16.45■□□□□ 0.22
KIF3A-201ENST00000378735 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
KIF3A-201ENST00000378735 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
KIF3A-201ENST00000378735 MORC2Q9Y6X9 1032 aaPredicted RBP16.45■□□□□ 0.22
KIF3A-201ENST00000378735 CCDC66A2RUB6 948 aa16.44■□□□□ 0.22
KIF3A-201ENST00000378735 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
KIF3A-201ENST00000378735 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
KIF3A-201ENST00000378735 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
KIF3A-201ENST00000378735 HMMRO75330 724 aa16.44■□□□□ 0.22
KIF3A-201ENST00000378735 PDE1AP54750 535 aa16.44■□□□□ 0.22
KIF3A-201ENST00000378735 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
KIF3A-201ENST00000378735 GDPD2Q9HCC8 539 aa16.43■□□□□ 0.22
KIF3A-201ENST00000378735 PAXBP1Q9Y5B6 917 aa16.43■□□□□ 0.22
KIF3A-201ENST00000378735 FBXO31Q5XUX0 539 aaPredicted RBP16.43■□□□□ 0.22
KIF3A-201ENST00000378735 SLFN14P0C7P3 912 aa16.43■□□□□ 0.22
KIF3A-201ENST00000378735 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
KIF3A-201ENST00000378735 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
KIF3A-201ENST00000378735 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
KIF3A-201ENST00000378735 ZSCAN22P10073 491 aaPredicted RBP16.41■□□□□ 0.22
KIF3A-201ENST00000378735 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
KIF3A-201ENST00000378735 SLC20A2Q08357 652 aa16.41■□□□□ 0.22
KIF3A-201ENST00000378735 PTPRCP08575 1304 aa16.4■□□□□ 0.22
KIF3A-201ENST00000378735 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
KIF3A-201ENST00000378735 ALKQ9UM73 1620 aa16.4■□□□□ 0.22
KIF3A-201ENST00000378735 PHACTR3Q96KR7 559 aa16.4■□□□□ 0.22
KIF3A-201ENST00000378735 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
KIF3A-201ENST00000378735 AP5Z1O43299 807 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 CCDC192P0DO97 292 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 DLC1Q96QB1 1528 aa16.39■□□□□ 0.21
KIF3A-201ENST00000378735 IPO4Q8TEX9 1081 aaKnown RBP16.39■□□□□ 0.21
KIF3A-201ENST00000378735 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
KIF3A-201ENST00000378735 TERF2Q15554 542 aa16.38■□□□□ 0.21
KIF3A-201ENST00000378735 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
KIF3A-201ENST00000378735 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
KIF3A-201ENST00000378735 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
KIF3A-201ENST00000378735 KIF18AQ8NI77 898 aa16.38■□□□□ 0.21
KIF3A-201ENST00000378735 MSH6P52701 1360 aa16.37■□□□□ 0.21
KIF3A-201ENST00000378735 TNRQ92752 1358 aa16.37■□□□□ 0.21
KIF3A-201ENST00000378735 CHMLP26374 656 aa16.37■□□□□ 0.21
KIF3A-201ENST00000378735 KRT222Q8N1A0 295 aa16.37■□□□□ 0.21
KIF3A-201ENST00000378735 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.37■□□□□ 0.21
KIF3A-201ENST00000378735 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
KIF3A-201ENST00000378735 FAM200AQ8TCP9 573 aa16.37■□□□□ 0.21
KIF3A-201ENST00000378735 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
KIF3A-201ENST00000378735 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
KIF3A-201ENST00000378735 STX6O43752 255 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 IGSF3O75054 1194 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 F13A1P00488 732 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 FOXD4L6Q3SYB3 417 aaPredicted RBP16.36■□□□□ 0.21
KIF3A-201ENST00000378735 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 FOXD4L3Q6VB84 417 aaPredicted RBP16.36■□□□□ 0.21
KIF3A-201ENST00000378735 ANO2Q9NQ90 1003 aa16.36■□□□□ 0.21
KIF3A-201ENST00000378735 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
KIF3A-201ENST00000378735 PTPRMP28827 1452 aa16.35■□□□□ 0.21
KIF3A-201ENST00000378735 MLECQ14165 292 aa16.35■□□□□ 0.21
KIF3A-201ENST00000378735 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
KIF3A-201ENST00000378735 HSPA4P34932 840 aa16.35■□□□□ 0.21
KIF3A-201ENST00000378735 SPC24Q8NBT2 197 aa16.35■□□□□ 0.21
KIF3A-201ENST00000378735 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
KIF3A-201ENST00000378735 TIGD1Q96MW7 591 aa16.35■□□□□ 0.21
KIF3A-201ENST00000378735 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms