RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 SBNO1A3KN83 1393 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
USP33-204ENST00000370794 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 MTMR7Q9Y216 660 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 ROBO2Q9HCK4 1378 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 PPP1R42Q7Z4L9 355 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
USP33-204ENST00000370794 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.046e-6■□□□□ 10.5
USP33-204ENST00000370794 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 PIP4K2AP48426 406 aaPredicted RBP15.28■□□□□ 0.04
USP33-204ENST00000370794 COPS6Q7L5N1 327 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
USP33-204ENST00000370794 PRDM15P57071 1507 aaPredicted RBP15.28■□□□□ 0.04
USP33-204ENST00000370794 H3BQV1 296 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
USP33-204ENST00000370794 RNF123Q5XPI4 1314 aa15.28■□□□□ 0.04
USP33-204ENST00000370794 POLR3AO14802 1390 aaPredicted RBP15.28■□□□□ 0.04
USP33-204ENST00000370794 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
USP33-204ENST00000370794 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
USP33-204ENST00000370794 SF3A1Q15459 793 aaKnown RBP15.27■□□□□ 0.04
USP33-204ENST00000370794 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
USP33-204ENST00000370794 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.045e-7■□□□□ 11.2
USP33-204ENST00000370794 CCDC34Q96HJ3 373 aa15.27■□□□□ 0.04
USP33-204ENST00000370794 CWC25Q9NXE8 425 aaPredicted RBP15.27■□□□□ 0.04
USP33-204ENST00000370794 C6orf229H3BNL8 230 aa15.27■□□□□ 0.03
USP33-204ENST00000370794 GBP4Q96PP9 640 aa15.27■□□□□ 0.03
USP33-204ENST00000370794 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 CDC45O75419 566 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 CHPF2Q9P2E5 772 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 IL16Q14005 1332 aa15.26■□□□□ 0.03
USP33-204ENST00000370794 IKQ13123 557 aaPredicted RBP15.26■□□□□ 0.03
USP33-204ENST00000370794 FOXD4L5Q5VV16 416 aaPredicted RBP15.26■□□□□ 0.03
USP33-204ENST00000370794 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
USP33-204ENST00000370794 FOXD4L4Q8WXT5 416 aaPredicted RBP15.26■□□□□ 0.03
USP33-204ENST00000370794 GZF1Q9H116 711 aaPredicted RBP15.26■□□□□ 0.03
USP33-204ENST00000370794 PIK3R4Q99570 1358 aa15.25■□□□□ 0.03
USP33-204ENST00000370794 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
USP33-204ENST00000370794 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
USP33-204ENST00000370794 SKAP1Q86WV1 359 aa15.25■□□□□ 0.03
USP33-204ENST00000370794 ZSCAN29Q8IWY8 852 aaPredicted RBP15.25■□□□□ 0.03
USP33-204ENST00000370794 MAP3K5Q99683 1374 aa15.25■□□□□ 0.03
USP33-204ENST00000370794 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 HIP1O00291 1037 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 CAVIN4Q5BKX8 364 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 JARID2Q92833 1246 aaPredicted RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 MCTP1Q6DN14 999 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 PTPRTO14522 1441 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 TRIM29Q14134 588 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 LDHAL6AQ6ZMR3 332 aa15.24■□□□□ 0.03
USP33-204ENST00000370794 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
USP33-204ENST00000370794 NIP7Q9Y221 180 aaKnown RBP eCLIP15.24■□□□□ 0.03
USP33-204ENST00000370794 PTPRCP08575 1304 aa15.23■□□□□ 0.03
USP33-204ENST00000370794 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
USP33-204ENST00000370794 AKAP2Q9Y2D5 859 aa15.23■□□□□ 0.03
USP33-204ENST00000370794 QTRT2Q9H974 415 aaKnown RBP15.23■□□□□ 0.03
USP33-204ENST00000370794 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
USP33-204ENST00000370794 ST5P78524 1137 aa15.23■□□□□ 0.03
USP33-204ENST00000370794 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
USP33-204ENST00000370794 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
USP33-204ENST00000370794 NACAP1Q9BZK3 213 aa15.22■□□□□ 0.03
USP33-204ENST00000370794 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
USP33-204ENST00000370794 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
USP33-204ENST00000370794 GNPATO15228 680 aa15.22■□□□□ 0.03
USP33-204ENST00000370794 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
USP33-204ENST00000370794 GLIPR1L2Q4G1C9 344 aa15.22■□□□□ 0.03
USP33-204ENST00000370794 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
USP33-204ENST00000370794 POLD1P28340 1107 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 IL13P35225 146 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 SART3Q15020 963 aaKnown RBP15.21■□□□□ 0.03
USP33-204ENST00000370794 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 WWC3Q9ULE0 1092 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
USP33-204ENST00000370794 C8orf58Q8NAV2 365 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 NLRP3Q96P20 1036 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 STK32BQ9NY57 414 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 TRIM27P14373 513 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
USP33-204ENST00000370794 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.02
USP33-204ENST00000370794 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
USP33-204ENST00000370794 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
USP33-204ENST00000370794 BAG6P46379 1132 aa15.2■□□□□ 0.02
USP33-204ENST00000370794 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
USP33-204ENST00000370794 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
USP33-204ENST00000370794 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
USP33-204ENST00000370794 STK11IPQ8N1F8 1099 aa15.2■□□□□ 0.02
USP33-204ENST00000370794 APBA3O96018 575 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms