RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 ACSBG1Q96GR2 724 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 YEATS2Q9ULM3 1422 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 BRMS1Q9HCU9 246 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 STK3Q13188 491 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 PER1O15534 1290 aaPredicted RBP16.97■□□□□ 0.31
PARVB-201ENST00000338758 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
PARVB-201ENST00000338758 PDCP20941 246 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
PARVB-201ENST00000338758 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
PARVB-201ENST00000338758 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 ABCC1P33527 1531 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 TDO2P48775 406 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 GSE1Q14687 1217 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
PARVB-201ENST00000338758 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
PARVB-201ENST00000338758 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.31
PARVB-201ENST00000338758 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
PARVB-201ENST00000338758 DDB1Q16531 1140 aa16.96■□□□□ 0.31
PARVB-201ENST00000338758 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
PARVB-201ENST00000338758 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
PARVB-201ENST00000338758 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.3
PARVB-201ENST00000338758 LTKP29376 864 aa16.95■□□□□ 0.3
PARVB-201ENST00000338758 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
PARVB-201ENST00000338758 CHPF2Q9P2E5 772 aa16.95■□□□□ 0.3
PARVB-201ENST00000338758 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
PARVB-201ENST00000338758 CCDC43Q96MW1 224 aaKnown RBP16.95■□□□□ 0.3
PARVB-201ENST00000338758 ZSCAN29Q8IWY8 852 aaPredicted RBP16.94■□□□□ 0.3
PARVB-201ENST00000338758 HOOK1Q9UJC3 728 aaKnown RBP16.94■□□□□ 0.3
PARVB-201ENST00000338758 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 IL2RBP14784 551 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 AK7Q96M32 723 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
PARVB-201ENST00000338758 SDF4Q9BRK5 362 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 CTNNA3Q9UI47 895 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
PARVB-201ENST00000338758 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
PARVB-201ENST00000338758 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
PARVB-201ENST00000338758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■■ 30.2
PARVB-201ENST00000338758 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 ANKIB1Q9P2G1 1089 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 LMTK3Q96Q04 1460 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
PARVB-201ENST00000338758 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
PARVB-201ENST00000338758 CAVIN4Q5BKX8 364 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 HOXC9P31274 260 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 TRPM2O94759 1503 aa16.93■□□□□ 0.3
PARVB-201ENST00000338758 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 IP6K1Q92551 441 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
PARVB-201ENST00000338758 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
PARVB-201ENST00000338758 TPM3P06753 285 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
PARVB-201ENST00000338758 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
PARVB-201ENST00000338758 FIBPO43427 364 aa16.91■□□□□ 0.3
PARVB-201ENST00000338758 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
PARVB-201ENST00000338758 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
PARVB-201ENST00000338758 MEIS3Q99687 375 aa16.91■□□□□ 0.3
PARVB-201ENST00000338758 CEBPZQ03701 1054 aaKnown RBP16.9■□□□□ 0.3
PARVB-201ENST00000338758 TPM2P07951 284 aa16.9■□□□□ 0.3
PARVB-201ENST00000338758 PDE4CQ08493 712 aa16.9■□□□□ 0.3
PARVB-201ENST00000338758 TRIM22Q8IYM9 498 aa16.9■□□□□ 0.3
PARVB-201ENST00000338758 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
PARVB-201ENST00000338758 ZNF219Q9P2Y4 722 aaPredicted RBP16.9■□□□□ 0.3
PARVB-201ENST00000338758 TPM1P09493 284 aa16.9■□□□□ 0.3
PARVB-201ENST00000338758 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
PARVB-201ENST00000338758 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
PARVB-201ENST00000338758 BTG4Q9NY30 223 aa16.89■□□□□ 0.29
PARVB-201ENST00000338758 CCDC69A6NI79 296 aa16.89■□□□□ 0.29
PARVB-201ENST00000338758 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.29
PARVB-201ENST00000338758 RFC4P35249 363 aa16.89■□□□□ 0.29
PARVB-201ENST00000338758 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
PARVB-201ENST00000338758 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
PARVB-201ENST00000338758 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
PARVB-201ENST00000338758 KRT32Q14532 448 aa16.88■□□□□ 0.29
PARVB-201ENST00000338758 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
PARVB-201ENST00000338758 PDRG1Q9NUG6 133 aa16.88■□□□□ 0.29
PARVB-201ENST00000338758 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
PARVB-201ENST00000338758 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
PARVB-201ENST00000338758 ABCA8O94911 1581 aa16.88■□□□□ 0.29
PARVB-201ENST00000338758 ZFYVE16Q7Z3T8 1539 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 SLC5A1P13866 664 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
PARVB-201ENST00000338758 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
PARVB-201ENST00000338758 STK38Q15208 465 aa16.87■□□□□ 0.29
PARVB-201ENST00000338758 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
PARVB-201ENST00000338758 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms