RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CWC22Q9HCG8 908 aaKnown RBP20.1■□□□□ 0.81
CDC42EP4-201ENST00000335793 IGSF3O75054 1194 aa20.1■□□□□ 0.81
CDC42EP4-201ENST00000335793 EIF2S2P20042 333 aaKnown RBP20.1■□□□□ 0.81
CDC42EP4-201ENST00000335793 CPS1P31327 1500 aa20.1■□□□□ 0.81
CDC42EP4-201ENST00000335793 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
CDC42EP4-201ENST00000335793 UQCRHLA0A096LP55 91 aa20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 UQCRHP07919 91 aa20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 MAP3K19Q56UN5 1328 aa20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 MAP4K4O95819 1239 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 CCDC173Q0VFZ6 552 aa20.09■□□□□ 0.81
CDC42EP4-201ENST00000335793 XPCQ01831 940 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP4-201ENST00000335793 RNF214Q8ND24 703 aa20.08■□□□□ 0.81
CDC42EP4-201ENST00000335793 ZBTB22O15209 634 aa20.08■□□□□ 0.8
CDC42EP4-201ENST00000335793 FLIIQ13045 1269 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 KIF20BQ96Q89 1820 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 GNAI3P08754 354 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 MX1P20591 662 aa20.07■□□□□ 0.8
CDC42EP4-201ENST00000335793 LRRFIP2Q9Y608 721 aaKnown RBP20.06■□□□□ 0.8
CDC42EP4-201ENST00000335793 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
CDC42EP4-201ENST00000335793 CBX1P83916 185 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 TMX3Q96JJ7 454 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 EYA1Q99502 592 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 LMBRD1Q9NUN5 540 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 PNMA6EA0A0J9YXQ4 647 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 SYCE3A1L190 88 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP4-201ENST00000335793 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 UBTFL1P0CB47 393 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 PRIM1P49642 420 aaKnown RBP20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 SURF6O75683 361 aaKnown RBP20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP4-201ENST00000335793 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
CDC42EP4-201ENST00000335793 USHBP1Q8N6Y0 703 aa20.03■□□□□ 0.8
CDC42EP4-201ENST00000335793 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
CDC42EP4-201ENST00000335793 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-201ENST00000335793 KIAA0232Q92628 1395 aa20.02■□□□□ 0.8
CDC42EP4-201ENST00000335793 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.8
CDC42EP4-201ENST00000335793 TAF7LQ5H9L4 462 aa20.02■□□□□ 0.8
CDC42EP4-201ENST00000335793 ESYT1Q9BSJ8 1104 aa20.02■□□□□ 0.8
CDC42EP4-201ENST00000335793 HDGFL1Q5TGJ6 251 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 TSC1Q92574 1164 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 GDPD2Q9HCC8 539 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 LTKP29376 864 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 LARP6Q9BRS8 491 aaKnown RBP20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 RBSNQ9H1K0 784 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 PALD1Q9ULE6 856 aa20.01■□□□□ 0.79
CDC42EP4-201ENST00000335793 RICTORQ6R327 1708 aa20■□□□□ 0.79
CDC42EP4-201ENST00000335793 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CDC42EP4-201ENST00000335793 ZSCAN30Q86W11 494 aa20■□□□□ 0.79
CDC42EP4-201ENST00000335793 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
CDC42EP4-201ENST00000335793 OFD1O75665 1012 aa20■□□□□ 0.79
CDC42EP4-201ENST00000335793 PDZRN4Q6ZMN7 1036 aaPredicted RBP20■□□□□ 0.79
CDC42EP4-201ENST00000335793 ABTB2Q8N961 1025 aa20■□□□□ 0.79
CDC42EP4-201ENST00000335793 ZNF830Q96NB3 372 aaPredicted RBP19.99■□□□□ 0.79
CDC42EP4-201ENST00000335793 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
CDC42EP4-201ENST00000335793 PLEKHG3A1L390 1219 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 TNRQ92752 1358 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 ATP8B2P98198 1209 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 PLCB2Q00722 1185 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 MPNDQ8N594 471 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 ZDHHC9Q9Y397 364 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 DLC1Q96QB1 1528 aa19.98■□□□□ 0.79
CDC42EP4-201ENST00000335793 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 CHMLP26374 656 aa19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 MCM2P49736 904 aa19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 UNC5CLQ8IV45 518 aa19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 PHAXQ9H814 394 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-201ENST00000335793 SRGAP3O43295 1099 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 NSFL1CQ9UNZ2 370 aaKnown RBP19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 ANXA1P04083 346 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 CDK11BP21127 795 aaKnown RBP19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 ZNF445P59923 1031 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 TMEM63CQ9P1W3 806 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 RGS12O14924 1447 aa19.96■□□□□ 0.79
CDC42EP4-201ENST00000335793 DTNBO60941 627 aa19.95■□□□□ 0.78
CDC42EP4-201ENST00000335793 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP4-201ENST00000335793 FLT4P35916 1363 aa19.95■□□□□ 0.78
CDC42EP4-201ENST00000335793 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 DMTNQ08495 405 aa19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 PPP1R42Q7Z4L9 355 aa19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 RBM33Q96EV2 1170 aaKnown RBP19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 SRCIN1Q9C0H9 1055 aa19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 OSBPL3Q9H4L5 887 aa19.94■□□□□ 0.78
CDC42EP4-201ENST00000335793 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 MBD3O95983 291 aa19.93■□□□□ 0.78
CDC42EP4-201ENST00000335793 ZSCAN20P17040 1043 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms