RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ST18O60284 1047 aa17.86■□□□□ 0.45
PTPN9-201ENST00000306726 LMOD2Q6P5Q4 547 aa17.86■□□□□ 0.45
PTPN9-201ENST00000306726 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
PTPN9-201ENST00000306726 SLC4A2P04920 1241 aa17.85■□□□□ 0.45
PTPN9-201ENST00000306726 AEBP1Q8IUX7 1158 aa17.85■□□□□ 0.45
PTPN9-201ENST00000306726 PRIM1P49642 420 aaKnown RBP17.85■□□□□ 0.45
PTPN9-201ENST00000306726 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
PTPN9-201ENST00000306726 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
PTPN9-201ENST00000306726 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
PTPN9-201ENST00000306726 COG3Q96JB2 828 aa17.84■□□□□ 0.45
PTPN9-201ENST00000306726 FOSBP53539 338 aa17.83■□□□□ 0.45
PTPN9-201ENST00000306726 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.45
PTPN9-201ENST00000306726 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.44
PTPN9-201ENST00000306726 ARHGEF10O15013 1369 aa17.83■□□□□ 0.44
PTPN9-201ENST00000306726 KCNJ4P48050 445 aa17.83■□□□□ 0.44
PTPN9-201ENST00000306726 FBXW7Q969H0 707 aa17.83■□□□□ 0.44
PTPN9-201ENST00000306726 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
PTPN9-201ENST00000306726 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
PTPN9-201ENST00000306726 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
PTPN9-201ENST00000306726 MEIS3Q99687 375 aa17.82■□□□□ 0.44
PTPN9-201ENST00000306726 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
PTPN9-201ENST00000306726 AHDC1Q5TGY3 1603 aaPredicted RBP17.81■□□□□ 0.44
PTPN9-201ENST00000306726 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
PTPN9-201ENST00000306726 FKBP5Q13451 457 aaPredicted RBP17.81■□□□□ 0.44
PTPN9-201ENST00000306726 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
PTPN9-201ENST00000306726 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
PTPN9-201ENST00000306726 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 KRT28Q7Z3Y7 464 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 TRPM3Q9HCF6 1732 aaPredicted RBP17.8■□□□□ 0.44
PTPN9-201ENST00000306726 FIBPO43427 364 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 HDAC1Q13547 482 aaPredicted RBP17.8■□□□□ 0.44
PTPN9-201ENST00000306726 CERKQ8TCT0 537 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 ORAI2Q96SN7 254 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 OVOS2A0A0J9YW53 1432 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 OVOS2Q6IE36 1432 aa17.8■□□□□ 0.44
PTPN9-201ENST00000306726 RBSNQ9H1K0 784 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 UQCRHLA0A096LP55 91 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 UQCRHP07919 91 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 GNAI1P63096 354 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
PTPN9-201ENST00000306726 SDSP20132 328 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 INTS3Q68E01 1043 aaKnown RBP17.78■□□□□ 0.44
PTPN9-201ENST00000306726 ZSCAN23Q3MJ62 389 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 PXDNQ92626 1479 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 FSD2A1L4K1 749 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 IGSF3O75054 1194 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 KCNH5Q8NCM2 988 aa17.78■□□□□ 0.44
PTPN9-201ENST00000306726 VAMP4O75379 141 aa17.77■□□□□ 0.44
PTPN9-201ENST00000306726 RAB3GAP1Q15042 981 aa17.77■□□□□ 0.44
PTPN9-201ENST00000306726 DRC7Q8IY82 874 aa17.77■□□□□ 0.44
PTPN9-201ENST00000306726 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
PTPN9-201ENST00000306726 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
PTPN9-201ENST00000306726 FOXO3O43524 673 aa17.77■□□□□ 0.44
PTPN9-201ENST00000306726 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.43
PTPN9-201ENST00000306726 BMP2KLQ5H9B9 411 aa17.77■□□□□ 0.43
PTPN9-201ENST00000306726 ZSCAN30Q86W11 494 aa17.77■□□□□ 0.43
PTPN9-201ENST00000306726 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.43
PTPN9-201ENST00000306726 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.43
PTPN9-201ENST00000306726 GSPT1P15170 499 aaKnown RBP17.76■□□□□ 0.43
PTPN9-201ENST00000306726 SIRT2Q8IXJ6 389 aa17.76■□□□□ 0.43
PTPN9-201ENST00000306726 PIK3C2AO00443 1686 aa17.76■□□□□ 0.43
PTPN9-201ENST00000306726 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 ZHX1Q9UKY1 873 aaPredicted RBP17.75■□□□□ 0.43
PTPN9-201ENST00000306726 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
PTPN9-201ENST00000306726 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 ROBO1Q9Y6N7 1651 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 CPA1P15085 419 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
PTPN9-201ENST00000306726 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
PTPN9-201ENST00000306726 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
PTPN9-201ENST00000306726 ABTB2Q8N961 1025 aa17.74■□□□□ 0.43
PTPN9-201ENST00000306726 ANXA1P04083 346 aa17.74■□□□□ 0.43
PTPN9-201ENST00000306726 PLEKHM2Q8IWE5 1019 aa17.74■□□□□ 0.43
PTPN9-201ENST00000306726 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
PTPN9-201ENST00000306726 NUCB2P80303 420 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 FERMT3Q86UX7 667 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 SLIT3O75094 1523 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 ABCC6O95255 1503 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 USP25Q9UHP3 1055 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 RABEP1Q15276 862 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
PTPN9-201ENST00000306726 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
PTPN9-201ENST00000306726 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
PTPN9-201ENST00000306726 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
PTPN9-201ENST00000306726 NLRP6P59044 892 aa17.72■□□□□ 0.43
PTPN9-201ENST00000306726 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
PTPN9-201ENST00000306726 G2E3Q7L622 706 aa17.72■□□□□ 0.43
PTPN9-201ENST00000306726 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
PTPN9-201ENST00000306726 RRP9O43818 475 aaKnown RBP17.71■□□□□ 0.43
PTPN9-201ENST00000306726 REC8O95072 547 aa17.71■□□□□ 0.43
PTPN9-201ENST00000306726 TTC12Q9H892 705 aaPredicted RBP17.71■□□□□ 0.43
PTPN9-201ENST00000306726 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
PTPN9-201ENST00000306726 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
PTPN9-201ENST00000306726 FCHSD2O94868 740 aa17.71■□□□□ 0.42
PTPN9-201ENST00000306726 MCCP23508 829 aa17.71■□□□□ 0.42
PTPN9-201ENST00000306726 AMPHP49418 695 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms