RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 FOXO3O43524 673 aa16.94■□□□□ 0.3
LPCAT1-201ENST00000283415 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
LPCAT1-201ENST00000283415 LTKP29376 864 aa16.94■□□□□ 0.3
LPCAT1-201ENST00000283415 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
LPCAT1-201ENST00000283415 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
LPCAT1-201ENST00000283415 LMO7Q8WWI1 1683 aa16.93■□□□□ 0.3
LPCAT1-201ENST00000283415 ADAMTS7Q9UKP4 1686 aa16.93■□□□□ 0.3
LPCAT1-201ENST00000283415 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
LPCAT1-201ENST00000283415 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
LPCAT1-201ENST00000283415 IL1RAPL2Q9NP60 686 aa16.92■□□□□ 0.3
LPCAT1-201ENST00000283415 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
LPCAT1-201ENST00000283415 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
LPCAT1-201ENST00000283415 SIPA1L3O60292 1781 aaPredicted RBP16.92■□□□□ 0.3
LPCAT1-201ENST00000283415 HMMRO75330 724 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 ANXA1P04083 346 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 PSME1Q06323 249 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 ACEP12821 1306 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 CLEC17AQ6ZS10 378 aa16.91■□□□□ 0.3
LPCAT1-201ENST00000283415 NFAT5O94916 1531 aa16.9■□□□□ 0.3
LPCAT1-201ENST00000283415 TEFQ10587 303 aa16.9■□□□□ 0.3
LPCAT1-201ENST00000283415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
LPCAT1-201ENST00000283415 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
LPCAT1-201ENST00000283415 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
LPCAT1-201ENST00000283415 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
LPCAT1-201ENST00000283415 DTNBO60941 627 aa16.89■□□□□ 0.29
LPCAT1-201ENST00000283415 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
LPCAT1-201ENST00000283415 PXDNLA1KZ92 1463 aa16.89■□□□□ 0.29
LPCAT1-201ENST00000283415 HSP90AA2PQ14568 343 aaPredicted RBP16.89■□□□□ 0.29
LPCAT1-201ENST00000283415 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
LPCAT1-201ENST00000283415 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
LPCAT1-201ENST00000283415 LMTK3Q96Q04 1460 aa16.88■□□□□ 0.29
LPCAT1-201ENST00000283415 PLEKHM2Q8IWE5 1019 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 PTPRCP08575 1304 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 FGD1P98174 961 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
LPCAT1-201ENST00000283415 CAVIN1Q6NZI2 390 aaKnown RBP16.86■□□□□ 0.29
LPCAT1-201ENST00000283415 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
LPCAT1-201ENST00000283415 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
LPCAT1-201ENST00000283415 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 MSH6P52701 1360 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
LPCAT1-201ENST00000283415 MEIS3Q99687 375 aa16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 FLT4P35916 1363 aa16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 CDC45O75419 566 aa16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 NEK4P51957 841 aa16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
LPCAT1-201ENST00000283415 CEP85Q6P2H3 762 aa16.83■□□□□ 0.29
LPCAT1-201ENST00000283415 CIZ1Q9ULV3 898 aaPredicted RBP16.83■□□□□ 0.29
LPCAT1-201ENST00000283415 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
LPCAT1-201ENST00000283415 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
LPCAT1-201ENST00000283415 MCCP23508 829 aa16.83■□□□□ 0.28
LPCAT1-201ENST00000283415 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
LPCAT1-201ENST00000283415 ST18O60284 1047 aa16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 OSBPL3Q9H4L5 887 aa16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 MRE11P49959 708 aa16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
LPCAT1-201ENST00000283415 SSFA2P28290 1259 aa16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
LPCAT1-201ENST00000283415 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-201ENST00000283415 RPAP2Q8IXW5 612 aaPredicted RBP16.8■□□□□ 0.28
LPCAT1-201ENST00000283415 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
LPCAT1-201ENST00000283415 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-201ENST00000283415 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-201ENST00000283415 UBTFL1P0CB47 393 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-201ENST00000283415 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-201ENST00000283415 SIL1Q9H173 461 aa16.79■□□□□ 0.28
LPCAT1-201ENST00000283415 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
LPCAT1-201ENST00000283415 CYP2E1P05181 493 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-201ENST00000283415 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 G2E3Q7L622 706 aa16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 SLIT3O75094 1523 aa16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 FOSBP53539 338 aa16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
LPCAT1-201ENST00000283415 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
LPCAT1-201ENST00000283415 MPRIPQ6WCQ1 1025 aa16.77■□□□□ 0.28
LPCAT1-201ENST00000283415 MST1RQ04912 1400 aa16.77■□□□□ 0.27
LPCAT1-201ENST00000283415 USP26Q9BXU7 913 aa16.77■□□□□ 0.27
LPCAT1-201ENST00000283415 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
LPCAT1-201ENST00000283415 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms