RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 BOLA2Q9H3K6 86 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 ATP2B1P20020 1258 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 TTLL5Q6EMB2 1281 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 PDILTQ8N807 584 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 GPT2Q8TD30 523 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 ESYT1Q9BSJ8 1104 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 LIMCH1Q9UPQ0 1083 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 RTEL1-TNFRSF6BF6WH68 1400 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 CCDC186Q7Z3E2 898 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
SRF-201ENST00000265354 CCDC8Q9H0W5 538 aaPredicted RBP20.32■□□□□ 0.84
SRF-201ENST00000265354 IL16Q14005 1332 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 PDCP20941 246 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
SRF-201ENST00000265354 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 G2E3Q7L622 706 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
SRF-201ENST00000265354 CCDC61Q9Y6R9 512 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 INSRP06213 1382 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 NSFL1CQ9UNZ2 370 aaKnown RBP20.31■□□□□ 0.84
SRF-201ENST00000265354 DISP1Q96F81 1524 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 FLIIQ13045 1269 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
SRF-201ENST00000265354 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
SRF-201ENST00000265354 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
SRF-201ENST00000265354 MCM5P33992 734 aa20.29■□□□□ 0.84
SRF-201ENST00000265354 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
SRF-201ENST00000265354 PSMA5P28066 241 aa20.29■□□□□ 0.84
SRF-201ENST00000265354 ZNF445P59923 1031 aa20.29■□□□□ 0.84
SRF-201ENST00000265354 TPM3P06753 285 aa20.28■□□□□ 0.84
SRF-201ENST00000265354 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
SRF-201ENST00000265354 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
SRF-201ENST00000265354 ABTB2Q8N961 1025 aa20.27■□□□□ 0.84
SRF-201ENST00000265354 NUP160Q12769 1436 aa20.27■□□□□ 0.84
SRF-201ENST00000265354 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
SRF-201ENST00000265354 CLIP2Q9UDT6 1046 aa20.27■□□□□ 0.83
SRF-201ENST00000265354 PTGS1P23219 599 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 UBE2HP62256 183 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 ZSCAN22P10073 491 aaPredicted RBP20.26■□□□□ 0.83
SRF-201ENST00000265354 ZNF165P49910 485 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 PPP1R9BQ96SB3 815 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 PALD1Q9ULE6 856 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 ANKRD36BQ8N2N9 1353 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 ISM2Q6H9L7 571 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 MYL6BP14649 208 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 TMX1Q9H3N1 280 aa20.26■□□□□ 0.83
SRF-201ENST00000265354 LUZP1Q86V48 1076 aa20.25■□□□□ 0.83
SRF-201ENST00000265354 LRRC2Q9BYS8 371 aa20.25■□□□□ 0.83
SRF-201ENST00000265354 WASHC4Q2M389 1173 aa20.25■□□□□ 0.83
SRF-201ENST00000265354 U2AF2P26368 475 aaKnown RBP eCLIP20.24■□□□□ 0.839e-6■□□□□ 10
SRF-201ENST00000265354 SIRT2Q8IXJ6 389 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 AK2P54819 239 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 KIF1BPQ96EK5 621 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 EID1Q9Y6B2 187 aa20.24■□□□□ 0.83
SRF-201ENST00000265354 BIN1O00499 593 aa20.23■□□□□ 0.83
SRF-201ENST00000265354 SYT1P21579 422 aa20.23■□□□□ 0.83
SRF-201ENST00000265354 HS1BP3Q53T59 392 aa20.22■□□□□ 0.83
SRF-201ENST00000265354 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
SRF-201ENST00000265354 CHMLP26374 656 aa20.22■□□□□ 0.83
SRF-201ENST00000265354 STK38Q15208 465 aa20.22■□□□□ 0.83
SRF-201ENST00000265354 PRIMPOLQ96LW4 560 aa20.22■□□□□ 0.83
SRF-201ENST00000265354 RBM33Q96EV2 1170 aaKnown RBP20.22■□□□□ 0.83
SRF-201ENST00000265354 POLR3GO15318 223 aaPredicted RBP20.21■□□□□ 0.83
SRF-201ENST00000265354 ANO6Q4KMQ2 910 aa20.21■□□□□ 0.83
SRF-201ENST00000265354 KIAA0556O60303 1618 aa20.21■□□□□ 0.83
SRF-201ENST00000265354 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
SRF-201ENST00000265354 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
SRF-201ENST00000265354 DNAJC25Q9H1X3 360 aa20.21■□□□□ 0.83
SRF-201ENST00000265354 PI4KAP2A4QPH2 592 aa20.2■□□□□ 0.82
SRF-201ENST00000265354 PI4KAP1Q8N8J0 262 aa20.2■□□□□ 0.82
SRF-201ENST00000265354 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
SRF-201ENST00000265354 GOLGA6L1Q8N7Z2 621 aa20.2■□□□□ 0.82
SRF-201ENST00000265354 PLA2R1Q13018 1463 aa20.2■□□□□ 0.82
SRF-201ENST00000265354 GLRX3O76003 335 aaKnown RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 TEX35Q5T0J7 233 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 RAB11FIP4Q86YS3 637 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 ZFP91Q96JP5 570 aaPredicted RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 PTPRTO14522 1441 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 SERPINC1P01008 464 aa20.19■□□□□ 0.82
SRF-201ENST00000265354 NAT10Q9H0A0 1025 aaKnown RBP20.19■□□□□ 0.82
SRF-201ENST00000265354 RIOK3O14730 519 aaKnown RBP20.18■□□□□ 0.82
SRF-201ENST00000265354 F13A1P00488 732 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms