RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 ANXA1P04083 346 aa22.43■■□□□ 1.18
LRP3-201ENST00000253193 LARP6Q9BRS8 491 aaKnown RBP22.43■■□□□ 1.18
LRP3-201ENST00000253193 SRGAP3O43295 1099 aa22.42■■□□□ 1.18
LRP3-201ENST00000253193 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
LRP3-201ENST00000253193 TMX3Q96JJ7 454 aa22.42■■□□□ 1.18
LRP3-201ENST00000253193 TAF7Q15545 349 aaPredicted RBP22.42■■□□□ 1.18
LRP3-201ENST00000253193 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
LRP3-201ENST00000253193 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
LRP3-201ENST00000253193 CCDC173Q0VFZ6 552 aa22.4■■□□□ 1.18
LRP3-201ENST00000253193 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
LRP3-201ENST00000253193 SYCE3A1L190 88 aa22.4■■□□□ 1.18
LRP3-201ENST00000253193 PHAXQ9H814 394 aaKnown RBP22.4■■□□□ 1.18
LRP3-201ENST00000253193 KIAA0232Q92628 1395 aa22.4■■□□□ 1.18
LRP3-201ENST00000253193 ESYT1Q9BSJ8 1104 aa22.4■■□□□ 1.18
LRP3-201ENST00000253193 ZSCAN23Q3MJ62 389 aa22.39■■□□□ 1.18
LRP3-201ENST00000253193 FLT4P35916 1363 aa22.39■■□□□ 1.17
LRP3-201ENST00000253193 GDPD2Q9HCC8 539 aa22.39■■□□□ 1.17
LRP3-201ENST00000253193 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.17
LRP3-201ENST00000253193 KIF24Q5T7B8 1368 aa22.39■■□□□ 1.17
LRP3-201ENST00000253193 SIRT1Q96EB6 747 aa22.39■■□□□ 1.17
LRP3-201ENST00000253193 PSME1Q06323 249 aa22.38■■□□□ 1.17
LRP3-201ENST00000253193 ATP8B2P98198 1209 aa22.38■■□□□ 1.17
LRP3-201ENST00000253193 PPP1R42Q7Z4L9 355 aa22.37■■□□□ 1.17
LRP3-201ENST00000253193 CWC27Q6UX04 472 aaKnown RBP22.36■■□□□ 1.17
LRP3-201ENST00000253193 DIAPH3Q9NSV4 1193 aa22.36■■□□□ 1.17
LRP3-201ENST00000253193 XPCQ01831 940 aaPredicted RBP22.35■■□□□ 1.17
LRP3-201ENST00000253193 TTC21AQ8NDW8 1320 aa22.35■■□□□ 1.17
LRP3-201ENST00000253193 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
LRP3-201ENST00000253193 MCM2P49736 904 aa22.35■■□□□ 1.17
LRP3-201ENST00000253193 AIMP1Q12904 312 aaKnown RBP22.35■■□□□ 1.17
LRP3-201ENST00000253193 MPNDQ8N594 471 aa22.35■■□□□ 1.17
LRP3-201ENST00000253193 PALD1Q9ULE6 856 aa22.35■■□□□ 1.17
LRP3-201ENST00000253193 LMBRD1Q9NUN5 540 aa22.34■■□□□ 1.17
LRP3-201ENST00000253193 CHMLP26374 656 aa22.34■■□□□ 1.17
LRP3-201ENST00000253193 THEMISQ8N1K5 641 aaPredicted RBP22.34■■□□□ 1.17
LRP3-201ENST00000253193 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
LRP3-201ENST00000253193 ESCO1Q5FWF5 840 aa22.34■■□□□ 1.17
LRP3-201ENST00000253193 PI4KAP2A4QPH2 592 aa22.33■■□□□ 1.17
LRP3-201ENST00000253193 HOXC9P31274 260 aa22.33■■□□□ 1.17
LRP3-201ENST00000253193 PI4KAP1Q8N8J0 262 aa22.33■■□□□ 1.17
LRP3-201ENST00000253193 USP6P35125 1406 aa22.33■■□□□ 1.17
LRP3-201ENST00000253193 DTNBO60941 627 aa22.33■■□□□ 1.17
LRP3-201ENST00000253193 DNTTIP2Q5QJE6 756 aaKnown RBP22.33■■□□□ 1.17
LRP3-201ENST00000253193 DDX54Q8TDD1 881 aaKnown RBP22.33■■□□□ 1.17
LRP3-201ENST00000253193 MPRIPQ6WCQ1 1025 aa22.33■■□□□ 1.16
LRP3-201ENST00000253193 SYAP1Q96A49 352 aaPredicted RBP22.33■■□□□ 1.16
LRP3-201ENST00000253193 C1orf141Q5JVX7 400 aa22.32■■□□□ 1.16
LRP3-201ENST00000253193 ZNF530Q6P9A1 599 aaPredicted RBP22.32■■□□□ 1.16
LRP3-201ENST00000253193 UNC5CLQ8IV45 518 aa22.32■■□□□ 1.16
LRP3-201ENST00000253193 SPG7Q9UQ90 795 aa22.32■■□□□ 1.16
LRP3-201ENST00000253193 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
LRP3-201ENST00000253193 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
LRP3-201ENST00000253193 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
LRP3-201ENST00000253193 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
LRP3-201ENST00000253193 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
LRP3-201ENST00000253193 CHPF2Q9P2E5 772 aa22.31■■□□□ 1.16
LRP3-201ENST00000253193 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 KCNA6P17658 529 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 ZMYND15Q9H091 742 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 USP44Q9H0E7 712 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 RICTORQ6R327 1708 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 KIF20BQ96Q89 1820 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 BTBD11A6QL63 1104 aa22.3■■□□□ 1.16
LRP3-201ENST00000253193 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
LRP3-201ENST00000253193 GLIPR1L2Q4G1C9 344 aa22.29■■□□□ 1.16
LRP3-201ENST00000253193 CLASRPQ8N2M8 674 aaKnown RBP22.29■■□□□ 1.16
LRP3-201ENST00000253193 RHPN1Q8TCX5 695 aa22.29■■□□□ 1.16
LRP3-201ENST00000253193 RBSNQ9H1K0 784 aa22.29■■□□□ 1.16
LRP3-201ENST00000253193 RRP9O43818 475 aaKnown RBP22.29■■□□□ 1.16
LRP3-201ENST00000253193 ZSCAN30Q86W11 494 aa22.29■■□□□ 1.16
LRP3-201ENST00000253193 MBD3O95983 291 aa22.29■■□□□ 1.16
LRP3-201ENST00000253193 LGR6Q9HBX8 967 aa22.28■■□□□ 1.16
LRP3-201ENST00000253193 SMC3Q9UQE7 1217 aa22.28■■□□□ 1.16
LRP3-201ENST00000253193 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
LRP3-201ENST00000253193 ARHGEF10O15013 1369 aa22.28■■□□□ 1.16
LRP3-201ENST00000253193 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
LRP3-201ENST00000253193 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.16
LRP3-201ENST00000253193 KIF1BPQ96EK5 621 aa22.27■■□□□ 1.16
LRP3-201ENST00000253193 GPATCH3Q96I76 525 aa22.27■■□□□ 1.16
LRP3-201ENST00000253193 NBPF7P0C2Y1 421 aaPredicted RBP22.27■■□□□ 1.16
LRP3-201ENST00000253193 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
LRP3-201ENST00000253193 GPT2Q8TD30 523 aa22.26■■□□□ 1.15
LRP3-201ENST00000253193 LRRC59Q96AG4 307 aaKnown RBP22.26■■□□□ 1.15
LRP3-201ENST00000253193 ARID3AQ99856 593 aa22.26■■□□□ 1.15
LRP3-201ENST00000253193 FIBPO43427 364 aa22.26■■□□□ 1.15
LRP3-201ENST00000253193 SIL1Q9H173 461 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 OSBPL3Q9H4L5 887 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 PHF8Q9UPP1 1060 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 R3HCC1Q9Y3T6 440 aaKnown RBP22.25■■□□□ 1.15
LRP3-201ENST00000253193 CRB1P82279 1406 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 VPS37CA5D8V6 355 aaPredicted RBP22.25■■□□□ 1.15
LRP3-201ENST00000253193 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
LRP3-201ENST00000253193 HSP90AB4PQ58FF6 505 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 NSFL1CQ9UNZ2 370 aaKnown RBP22.25■■□□□ 1.15
LRP3-201ENST00000253193 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
LRP3-201ENST00000253193 PPP1R9BQ96SB3 815 aa22.24■■□□□ 1.15
LRP3-201ENST00000253193 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
LRP3-201ENST00000253193 TMEM63CQ9P1W3 806 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms