RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TRPM3Q9HCF6 1732 aaPredicted RBP19.21■□□□□ 0.67
CTSD-201ENST00000236671 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
CTSD-201ENST00000236671 MCM10Q7L590 875 aa19.21■□□□□ 0.67
CTSD-201ENST00000236671 OTUD7AQ8TE49 926 aaPredicted RBP19.21■□□□□ 0.67
CTSD-201ENST00000236671 PTPRCP08575 1304 aa19.2■□□□□ 0.66
CTSD-201ENST00000236671 SSFA2P28290 1259 aa19.2■□□□□ 0.66
CTSD-201ENST00000236671 RABEP1Q15276 862 aa19.2■□□□□ 0.66
CTSD-201ENST00000236671 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
CTSD-201ENST00000236671 AHDC1Q5TGY3 1603 aaPredicted RBP19.2■□□□□ 0.66
CTSD-201ENST00000236671 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
CTSD-201ENST00000236671 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
CTSD-201ENST00000236671 CRB1P82279 1406 aa19.19■□□□□ 0.66
CTSD-201ENST00000236671 USP6P35125 1406 aa19.19■□□□□ 0.66
CTSD-201ENST00000236671 GAS2L3Q86XJ1 694 aa19.18■□□□□ 0.66
CTSD-201ENST00000236671 USP26Q9BXU7 913 aa19.18■□□□□ 0.66
CTSD-201ENST00000236671 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
CTSD-201ENST00000236671 CABLES1Q8TDN4 633 aa19.18■□□□□ 0.66
CTSD-201ENST00000236671 MEIS3Q99687 375 aa19.17■□□□□ 0.66
CTSD-201ENST00000236671 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
CTSD-201ENST00000236671 USP31Q70CQ4 1352 aa19.16■□□□□ 0.66
CTSD-201ENST00000236671 PIK3C2AO00443 1686 aa19.16■□□□□ 0.66
CTSD-201ENST00000236671 SDSP20132 328 aa19.16■□□□□ 0.66
CTSD-201ENST00000236671 CLCN1P35523 988 aa19.16■□□□□ 0.66
CTSD-201ENST00000236671 SMARCA5O60264 1052 aaPredicted RBP19.15■□□□□ 0.66
CTSD-201ENST00000236671 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
CTSD-201ENST00000236671 SOX12O15370 315 aa19.14■□□□□ 0.65
CTSD-201ENST00000236671 BAG4O95429 457 aaKnown RBP19.14■□□□□ 0.65
CTSD-201ENST00000236671 SSH2Q76I76 1423 aa19.14■□□□□ 0.65
CTSD-201ENST00000236671 ARHGEF10O15013 1369 aa19.13■□□□□ 0.65
CTSD-201ENST00000236671 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
CTSD-201ENST00000236671 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
CTSD-201ENST00000236671 SPATA31A3Q5VYP0 1347 aa19.12■□□□□ 0.65
CTSD-201ENST00000236671 GOLGA6L22H0YM25 854 aa19.12■□□□□ 0.65
CTSD-201ENST00000236671 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
CTSD-201ENST00000236671 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
CTSD-201ENST00000236671 APBB1O00213 710 aa19.12■□□□□ 0.65
CTSD-201ENST00000236671 CYP2E1P05181 493 aaPredicted RBP19.12■□□□□ 0.65
CTSD-201ENST00000236671 TNS3Q68CZ2 1445 aa19.11■□□□□ 0.65
CTSD-201ENST00000236671 KLHL40Q2TBA0 621 aa19.11■□□□□ 0.65
CTSD-201ENST00000236671 CASC1Q6TDU7 716 aa19.11■□□□□ 0.65
CTSD-201ENST00000236671 IBTKQ9P2D0 1353 aaPredicted RBP19.11■□□□□ 0.65
CTSD-201ENST00000236671 MIS18AQ9NYP9 233 aa19.1■□□□□ 0.65
CTSD-201ENST00000236671 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
CTSD-201ENST00000236671 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
CTSD-201ENST00000236671 NUCB2P80303 420 aa19.09■□□□□ 0.65
CTSD-201ENST00000236671 G2E3Q7L622 706 aa19.09■□□□□ 0.65
CTSD-201ENST00000236671 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
CTSD-201ENST00000236671 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
CTSD-201ENST00000236671 HMMRO75330 724 aa19.09■□□□□ 0.65
CTSD-201ENST00000236671 AK9Q5TCS8 1911 aa19.08■□□□□ 0.65
CTSD-201ENST00000236671 ERBB4Q15303 1308 aa19.08■□□□□ 0.65
CTSD-201ENST00000236671 MTHFSDQ2M296 383 aaKnown RBP19.08■□□□□ 0.64
CTSD-201ENST00000236671 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.64
CTSD-201ENST00000236671 MED1Q15648 1581 aaPredicted RBP19.08■□□□□ 0.64
CTSD-201ENST00000236671 KDRP35968 1356 aa19.08■□□□□ 0.64
CTSD-201ENST00000236671 REC8O95072 547 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 CCT4P50991 539 aaKnown RBP19.07■□□□□ 0.64
CTSD-201ENST00000236671 NLRP6P59044 892 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 TSPYL4Q9UJ04 414 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
CTSD-201ENST00000236671 ESPNB1AK53 854 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 F6X3S4 739 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
CTSD-201ENST00000236671 ERC2O15083 957 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 ST18O60284 1047 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 PKP1Q13835 747 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 CRYBG1Q9Y4K1 1723 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 PDE1AP54750 535 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 CWC22Q9HCG8 908 aaKnown RBP19.06■□□□□ 0.64
CTSD-201ENST00000236671 FLT4P35916 1363 aa19.06■□□□□ 0.64
CTSD-201ENST00000236671 LRRC37A3O60309 1634 aa19.05■□□□□ 0.64
CTSD-201ENST00000236671 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
CTSD-201ENST00000236671 RTF1Q92541 710 aaKnown RBP19.05■□□□□ 0.64
CTSD-201ENST00000236671 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
CTSD-201ENST00000236671 MCTP1Q6DN14 999 aa19.04■□□□□ 0.64
CTSD-201ENST00000236671 TUBGCP6Q96RT7 1819 aa19.04■□□□□ 0.64
CTSD-201ENST00000236671 LRP6O75581 1613 aa19.04■□□□□ 0.64
CTSD-201ENST00000236671 FAM208AQ9UK61 1670 aaKnown RBP19.04■□□□□ 0.64
CTSD-201ENST00000236671 SALL3Q9BXA9 1300 aa19.04■□□□□ 0.64
CTSD-201ENST00000236671 ADAMTS2O95450 1211 aa19.03■□□□□ 0.64
CTSD-201ENST00000236671 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
CTSD-201ENST00000236671 LMBRD1Q9NUN5 540 aa19.03■□□□□ 0.64
CTSD-201ENST00000236671 IGSF1Q8N6C5 1336 aa19.03■□□□□ 0.64
CTSD-201ENST00000236671 PHRF1Q9P1Y6 1649 aaKnown RBP19.03■□□□□ 0.64
CTSD-201ENST00000236671 GNAI2P04899 355 aa19.03■□□□□ 0.64
CTSD-201ENST00000236671 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
CTSD-201ENST00000236671 EP400Q96L91 3159 aa19.02■□□□□ 0.64
CTSD-201ENST00000236671 JCADQ9P266 1359 aa19.02■□□□□ 0.64
CTSD-201ENST00000236671 ZBTB7CA1YPR0 619 aa19.02■□□□□ 0.64
CTSD-201ENST00000236671 ZNF445P59923 1031 aa19.02■□□□□ 0.64
CTSD-201ENST00000236671 ZC3H6P61129 1189 aaKnown RBP19.02■□□□□ 0.64
CTSD-201ENST00000236671 NASPP49321 788 aaPredicted RBP19.01■□□□□ 0.63
CTSD-201ENST00000236671 PPP1R9BQ96SB3 815 aa19.01■□□□□ 0.63
CTSD-201ENST00000236671 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
CTSD-201ENST00000236671 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
CTSD-201ENST00000236671 EYA1Q99502 592 aa19.01■□□□□ 0.63
CTSD-201ENST00000236671 ZDHHC9Q9Y397 364 aa19.01■□□□□ 0.63
CTSD-201ENST00000236671 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
CTSD-201ENST00000236671 CCDC173Q0VFZ6 552 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms