RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
SF3A2-201ENST00000221494 NFAT5O94916 1531 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 GCP02774 474 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 GNAI1P63096 354 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 TRPM3Q9HCF6 1732 aaPredicted RBP19.61■□□□□ 0.73
SF3A2-201ENST00000221494 OFD1O75665 1012 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 SULT6B1Q6IMI4 303 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
SF3A2-201ENST00000221494 API5Q9BZZ5 524 aaKnown RBP19.61■□□□□ 0.73
SF3A2-201ENST00000221494 PDCL3Q9H2J4 239 aa19.6■□□□□ 0.73
SF3A2-201ENST00000221494 VAMP4O75379 141 aa19.59■□□□□ 0.73
SF3A2-201ENST00000221494 CYP2E1P05181 493 aaPredicted RBP19.59■□□□□ 0.73
SF3A2-201ENST00000221494 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
SF3A2-201ENST00000221494 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
SF3A2-201ENST00000221494 DDX49Q9Y6V7 483 aaKnown RBP19.59■□□□□ 0.73
SF3A2-201ENST00000221494 RTL1A6NKG5 1358 aa19.59■□□□□ 0.73
SF3A2-201ENST00000221494 IP6K1Q92551 441 aa19.59■□□□□ 0.73
SF3A2-201ENST00000221494 SLIT3O75094 1523 aa19.58■□□□□ 0.73
SF3A2-201ENST00000221494 SSFA2P28290 1259 aa19.58■□□□□ 0.73
SF3A2-201ENST00000221494 LMOD3Q0VAK6 560 aa19.58■□□□□ 0.73
SF3A2-201ENST00000221494 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
SF3A2-201ENST00000221494 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 ARHGEF25Q86VW2 580 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 EYA1Q99502 592 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 PXDNQ92626 1479 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 ARHGEF10O15013 1369 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 MCM5P33992 734 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 MAP7D2Q96T17 732 aa19.57■□□□□ 0.72
SF3A2-201ENST00000221494 IGSF1Q8N6C5 1336 aa19.56■□□□□ 0.72
SF3A2-201ENST00000221494 MSNP26038 577 aaKnown RBP19.56■□□□□ 0.72
SF3A2-201ENST00000221494 DLG5Q8TDM6 1919 aa19.56■□□□□ 0.72
SF3A2-201ENST00000221494 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
SF3A2-201ENST00000221494 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
SF3A2-201ENST00000221494 RGPD1P0DJD0 1748 aa19.55■□□□□ 0.72
SF3A2-201ENST00000221494 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
SF3A2-201ENST00000221494 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
SF3A2-201ENST00000221494 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
SF3A2-201ENST00000221494 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
SF3A2-201ENST00000221494 KDRP35968 1356 aa19.54■□□□□ 0.72
SF3A2-201ENST00000221494 ZNF500O60304 480 aaPredicted RBP19.54■□□□□ 0.72
SF3A2-201ENST00000221494 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
SF3A2-201ENST00000221494 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
SF3A2-201ENST00000221494 ALS2Q96Q42 1657 aa19.53■□□□□ 0.72
SF3A2-201ENST00000221494 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
SF3A2-201ENST00000221494 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
SF3A2-201ENST00000221494 BCL11BQ9C0K0 894 aaPredicted RBP19.53■□□□□ 0.72
SF3A2-201ENST00000221494 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
SF3A2-201ENST00000221494 KIAA1211Q6ZU35 1233 aa19.52■□□□□ 0.72
SF3A2-201ENST00000221494 NOL7Q9UMY1 257 aaKnown RBP19.52■□□□□ 0.72
SF3A2-201ENST00000221494 ST18O60284 1047 aa19.52■□□□□ 0.71
SF3A2-201ENST00000221494 LTV1Q96GA3 475 aaPredicted RBP19.52■□□□□ 0.71
SF3A2-201ENST00000221494 USP26Q9BXU7 913 aa19.52■□□□□ 0.71
SF3A2-201ENST00000221494 LMBRD1Q9NUN5 540 aa19.52■□□□□ 0.71
SF3A2-201ENST00000221494 MED1Q15648 1581 aaPredicted RBP19.51■□□□□ 0.71
SF3A2-201ENST00000221494 AK9Q5TCS8 1911 aa19.51■□□□□ 0.71
SF3A2-201ENST00000221494 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
SF3A2-201ENST00000221494 GSPT1P15170 499 aaKnown RBP19.5■□□□□ 0.71
SF3A2-201ENST00000221494 CSPP1Q1MSJ5 1256 aa19.5■□□□□ 0.71
SF3A2-201ENST00000221494 ZSCAN23Q3MJ62 389 aa19.5■□□□□ 0.71
SF3A2-201ENST00000221494 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
SF3A2-201ENST00000221494 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
SF3A2-201ENST00000221494 LTBP4Q8N2S1 1624 aa19.49■□□□□ 0.71
SF3A2-201ENST00000221494 PHRF1Q9P1Y6 1649 aaKnown RBP19.49■□□□□ 0.71
SF3A2-201ENST00000221494 REC8O95072 547 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 MTERF4Q7Z6M4 381 aaKnown RBP19.48■□□□□ 0.71
SF3A2-201ENST00000221494 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 ATP10DQ9P241 1426 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
SF3A2-201ENST00000221494 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
SF3A2-201ENST00000221494 ANKRD44Q8N8A2 993 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 AXIN2Q9Y2T1 843 aa19.48■□□□□ 0.71
SF3A2-201ENST00000221494 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
SF3A2-201ENST00000221494 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
SF3A2-201ENST00000221494 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
SF3A2-201ENST00000221494 MBD3O95983 291 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
SF3A2-201ENST00000221494 MBIPQ9NS73 344 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 LTN1O94822 1766 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 MCM2P49736 904 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 ZMYND15Q9H091 742 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
SF3A2-201ENST00000221494 MTHFSDQ2M296 383 aaKnown RBP19.45■□□□□ 0.7
SF3A2-201ENST00000221494 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
SF3A2-201ENST00000221494 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
SF3A2-201ENST00000221494 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
SF3A2-201ENST00000221494 USHBP1Q8N6Y0 703 aa19.44■□□□□ 0.7
SF3A2-201ENST00000221494 TSPYL6Q8N831 410 aa19.44■□□□□ 0.7
SF3A2-201ENST00000221494 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
SF3A2-201ENST00000221494 LRSAM1Q6UWE0 723 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 ANKRD24Q8TF21 1146 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 LRRC59Q96AG4 307 aaKnown RBP19.43■□□□□ 0.7
SF3A2-201ENST00000221494 CCDC39Q9UFE4 941 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 ZKSCAN5Q9Y2L8 839 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 DCTN1Q14203 1278 aa19.43■□□□□ 0.7
SF3A2-201ENST00000221494 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 471.4 ms