Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H2afb3S4R1G7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb3S4R1G7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Gm43799-201ENSMUST00000201845 579 ntBASIC14.34□□□□□ -0.11
H2afb3S4R1G7 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb3S4R1G7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb3S4R1G7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb3S4R1G7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb3S4R1G7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb3S4R1G7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb3S4R1G7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb3S4R1G7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms