Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Nr1h3Q9Z0Y9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nr1h3Q9Z0Y9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1h3Q9Z0Y9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm12260-201ENSMUST00000122447 411 ntBASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1h3Q9Z0Y9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1h3Q9Z0Y9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1h3Q9Z0Y9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms