Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.54■□□□□ 0.08
Cdh17Q9R100 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.54■□□□□ 0.08
Cdh17Q9R100 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh17Q9R100 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Mir6404-201ENSMUST00000183699 94 ntBASIC15.53■□□□□ 0.08
Cdh17Q9R100 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh17Q9R100 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh17Q9R100 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.52■□□□□ 0.08
Cdh17Q9R100 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cdh17Q9R100 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh17Q9R100 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.51■□□□□ 0.07
Cdh17Q9R100 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Gm10013-201ENSMUST00000106074 672 ntBASIC15.51■□□□□ 0.07
Cdh17Q9R100 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh17Q9R100 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdh17Q9R100 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms