Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps29Q9QZ88 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps29Q9QZ88 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Gm23634-201ENSMUST00000175071 91 ntBASIC15.26■□□□□ 0.03
Vps29Q9QZ88 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps29Q9QZ88 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Mir7071-201ENSMUST00000184847 69 ntBASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Gm17808-201ENSMUST00000200859 894 ntBASIC15.25■□□□□ 0.03
Vps29Q9QZ88 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps29Q9QZ88 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gm6659-201ENSMUST00000174752 547 ntBASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gm29518-201ENSMUST00000190858 372 ntBASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vps29Q9QZ88 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms