Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rpf2Q9JJ80 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Gm22240-201ENSMUST00000175225 82 ntBASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpf2Q9JJ80 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpf2Q9JJ80 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Rpf2Q9JJ80 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm13559-201ENSMUST00000120476 863 ntBASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Gm27011-201ENSMUST00000182352 972 ntBASIC16.91■□□□□ 0.3
Rpf2Q9JJ80 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms