Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gm44430-201ENSMUST00000203376 995 ntBASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gm18959-201ENSMUST00000208954 655 ntBASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rbfox1Q9JJ43 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rbfox1Q9JJ43 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rbfox1Q9JJ43 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rbfox1Q9JJ43 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Gm27011-201ENSMUST00000182352 972 ntBASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rbfox1Q9JJ43 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Gm10052-201ENSMUST00000168019 960 ntBASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Gm7729-201ENSMUST00000050143 801 ntBASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rbfox1Q9JJ43 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.56□□□□□ -0.24
Rbfox1Q9JJ43 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms