Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.87□□□□□ -0.35
Smco4Q9JIS3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Gm43060-201ENSMUST00000200621 289 ntBASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smco4Q9JIS3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smco4Q9JIS3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smco4Q9JIS3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms