Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rtn3Q9ES97 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rtn3Q9ES97 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rtn3Q9ES97 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rtn3Q9ES97 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rtn3Q9ES97 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rtn3Q9ES97 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rtn3Q9ES97 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Rtn3Q9ES97 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Gm28033-201ENSMUST00000184224 96 ntBASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rtn3Q9ES97 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms