Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Ube4bQ9ES00 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.36■□□□□ 0.05
Ube4bQ9ES00 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ube4bQ9ES00 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ube4bQ9ES00 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Gm27275-201ENSMUST00000184318 272 ntBASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ube4bQ9ES00 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms