Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx2-4Q9EQM3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Gm27430-201ENSMUST00000184585 107 ntBASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Gm44333-201ENSMUST00000197168 107 ntBASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Thap2-203ENSMUST00000218989 527 ntBASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx2-4Q9EQM3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx2-4Q9EQM3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nkx2-4Q9EQM3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-4Q9EQM3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.26■□□□□ 0.19
Nkx2-4Q9EQM3 Gm27437-201ENSMUST00000183429 107 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms