Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rrp8Q9DB85 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rrp8Q9DB85 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Gm7787-201ENSMUST00000216858 688 ntBASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.53■□□□□ 0.08
Rrp8Q9DB85 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rrp8Q9DB85 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rrp8Q9DB85 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms