Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm12497-201ENSMUST00000138778 237 ntBASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ssmem1Q9D9Y8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssmem1Q9D9Y8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Mir8098-201ENSMUST00000184011 137 ntBASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Ssmem1Q9D9Y8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Gm28659-201ENSMUST00000188013 759 ntBASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ssmem1Q9D9Y8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms