Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp5Q9D7S9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Sybu-209ENSMUST00000228639 4113 ntBASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp5Q9D7S9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp5Q9D7S9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp5Q9D7S9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp5Q9D7S9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms