Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tube1Q9D6T1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tube1Q9D6T1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.67■□□□□ 0.42
Tube1Q9D6T1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tube1Q9D6T1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tube1Q9D6T1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Rps4l-201ENSMUST00000071745 943 ntBASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tube1Q9D6T1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms